Gene BBta_0787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0787 
Symbol 
ID5153755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp806611 
End bp807204 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content62% 
IMG OID640555785 
Productputative electron transport protein 
Protein accessionYP_001236955 
Protein GI148252370 
COG category[R] General function prediction only 
COG ID[COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00305145 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGCGTA ATGTCACGCG CCCGCTCGTC ATCGTCGGCG CCTTTGCCGC CAGCCTGGTG 
GTCGGGCTCT CACTGATGTT CCTGATCATG GGGGGCGGGC GGAATATCGC GGCGCCGGCC
GCGATCGGCG GCCCGTTTCA ACTGACGGAT CAGAGCGGCG CGGTCGTCAC CGAGCAGAGC
CTGCAGGGAC GGCCAACCCT GATCTTCTTC GGCTTCACCC ATTGTCCGGA CGTCTGTCCG
ACCTCGCTGT TCGAGATCTC CGAGGTGCTG CGCGCCATGG GCAAGGACGC CGACAGCGTC
AACGCCTATT TCATCTCGGT GGATCCCGAG CGAGACAATC CGGCGACGAT GAAGGATTAC
CTCTCCAGCT TCGATCCGCA TCTGAAGGGG CTGACCGGCG ATCCCGAGGT GCTCGCCAAG
GTGCTCACCG AATACCGCGT CTATGCCAAG AAGGTTCCGC TCAAGGACGG CGACTACACC
ATGGACCATA CGGCCCTGGT GTATCTGATG GATCGCAATG GCCGGTTCGT TGCGCCTTTC
AACCTGAAGC GGACCCCGGA GGAAGCGGCA GCCGACCTGA AAAAATACCT CTGA
 
Protein sequence
MPRNVTRPLV IVGAFAASLV VGLSLMFLIM GGGRNIAAPA AIGGPFQLTD QSGAVVTEQS 
LQGRPTLIFF GFTHCPDVCP TSLFEISEVL RAMGKDADSV NAYFISVDPE RDNPATMKDY
LSSFDPHLKG LTGDPEVLAK VLTEYRVYAK KVPLKDGDYT MDHTALVYLM DRNGRFVAPF
NLKRTPEEAA ADLKKYL