Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0787 |
Symbol | |
ID | 5153755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 806611 |
End bp | 807204 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640555785 |
Product | putative electron transport protein |
Protein accession | YP_001236955 |
Protein GI | 148252370 |
COG category | [R] General function prediction only |
COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00305145 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCCGCGTA ATGTCACGCG CCCGCTCGTC ATCGTCGGCG CCTTTGCCGC CAGCCTGGTG GTCGGGCTCT CACTGATGTT CCTGATCATG GGGGGCGGGC GGAATATCGC GGCGCCGGCC GCGATCGGCG GCCCGTTTCA ACTGACGGAT CAGAGCGGCG CGGTCGTCAC CGAGCAGAGC CTGCAGGGAC GGCCAACCCT GATCTTCTTC GGCTTCACCC ATTGTCCGGA CGTCTGTCCG ACCTCGCTGT TCGAGATCTC CGAGGTGCTG CGCGCCATGG GCAAGGACGC CGACAGCGTC AACGCCTATT TCATCTCGGT GGATCCCGAG CGAGACAATC CGGCGACGAT GAAGGATTAC CTCTCCAGCT TCGATCCGCA TCTGAAGGGG CTGACCGGCG ATCCCGAGGT GCTCGCCAAG GTGCTCACCG AATACCGCGT CTATGCCAAG AAGGTTCCGC TCAAGGACGG CGACTACACC ATGGACCATA CGGCCCTGGT GTATCTGATG GATCGCAATG GCCGGTTCGT TGCGCCTTTC AACCTGAAGC GGACCCCGGA GGAAGCGGCA GCCGACCTGA AAAAATACCT CTGA
|
Protein sequence | MPRNVTRPLV IVGAFAASLV VGLSLMFLIM GGGRNIAAPA AIGGPFQLTD QSGAVVTEQS LQGRPTLIFF GFTHCPDVCP TSLFEISEVL RAMGKDADSV NAYFISVDPE RDNPATMKDY LSSFDPHLKG LTGDPEVLAK VLTEYRVYAK KVPLKDGDYT MDHTALVYLM DRNGRFVAPF NLKRTPEEAA ADLKKYL
|
| |