Gene BBta_0777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0777 
SymbolidnO 
ID5153774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp799935 
End bp800690 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content65% 
IMG OID640555777 
Productgluconate 5-dehydrogenase 
Protein accessionYP_001236947 
Protein GI148252362 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.618291 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00200145 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCGGTCG ACTTGTTCGA TCTGACGGGG CGTCGTGCTC TGGTGACCGG ATCCTCTCAA 
GGAATCGGCC TTGCGCTCGC GCACGGTCTC TCCGCGGCCG GCGCCGAAAT CGTGCTCAAT
GGCCGCGACG AGACGAAGCT CGCCCGCGCT GAAAGCGCGA TTGCGGGATC ACGCAGGCTC
GCTTTCGATG TCACCGATCA TGCGGCTGCG AGAGCCGCGG TCGATCGTTT CGAGGCTGAG
ATCGGCCCGA TCGATATTCT CGTCAACAAC GCCGGCATGC AGCATCGGGC GCCGCTCGAG
GAGTTTCCGG ACGAGGCGTT TCAGCGCCTG CTGCAGACCA ACATCGCCTC GGTGTTCAAC
GTCGGCCAAG CCTGCGCCCG CCATATGATC GGGCGGCGCG CCGGCAAGAT CATCAACATC
GCCTCGGTCC AGTCCGCGCT CGCCCGTCCC TCGATTGCCC CCTACACGGC AACGAAAGGC
GCAGTGGCGA ACCTGACCAA GGGCATGGCG ACCGATTGGG CGAAGCATGG CCTCCAGGTC
AACGCGATCG CGCCTGGCTA TTTCGACACG CCGCTCAACG CGGCGCTGGT GGCTGATCCG
GCCTTCTCTG CCTGGCTGGA AAAACGCACC CCTGCGGGGC GCTGGGGCAA GGTCGAAGAG
CTCGTCGGCG CCTGCATCTT CCTCGCCTCG GCTGCATCGT CCTTCGTCAA CGGGCACGTG
CTCTATGTCG ACGGCGGCAT CACCGCCTCG CTTTGA
 
Protein sequence
MAVDLFDLTG RRALVTGSSQ GIGLALAHGL SAAGAEIVLN GRDETKLARA ESAIAGSRRL 
AFDVTDHAAA RAAVDRFEAE IGPIDILVNN AGMQHRAPLE EFPDEAFQRL LQTNIASVFN
VGQACARHMI GRRAGKIINI ASVQSALARP SIAPYTATKG AVANLTKGMA TDWAKHGLQV
NAIAPGYFDT PLNAALVADP AFSAWLEKRT PAGRWGKVEE LVGACIFLAS AASSFVNGHV
LYVDGGITAS L