Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0777 |
Symbol | idnO |
ID | 5153774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 799935 |
End bp | 800690 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640555777 |
Product | gluconate 5-dehydrogenase |
Protein accession | YP_001236947 |
Protein GI | 148252362 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.618291 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.00200145 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGCGGTCG ACTTGTTCGA TCTGACGGGG CGTCGTGCTC TGGTGACCGG ATCCTCTCAA GGAATCGGCC TTGCGCTCGC GCACGGTCTC TCCGCGGCCG GCGCCGAAAT CGTGCTCAAT GGCCGCGACG AGACGAAGCT CGCCCGCGCT GAAAGCGCGA TTGCGGGATC ACGCAGGCTC GCTTTCGATG TCACCGATCA TGCGGCTGCG AGAGCCGCGG TCGATCGTTT CGAGGCTGAG ATCGGCCCGA TCGATATTCT CGTCAACAAC GCCGGCATGC AGCATCGGGC GCCGCTCGAG GAGTTTCCGG ACGAGGCGTT TCAGCGCCTG CTGCAGACCA ACATCGCCTC GGTGTTCAAC GTCGGCCAAG CCTGCGCCCG CCATATGATC GGGCGGCGCG CCGGCAAGAT CATCAACATC GCCTCGGTCC AGTCCGCGCT CGCCCGTCCC TCGATTGCCC CCTACACGGC AACGAAAGGC GCAGTGGCGA ACCTGACCAA GGGCATGGCG ACCGATTGGG CGAAGCATGG CCTCCAGGTC AACGCGATCG CGCCTGGCTA TTTCGACACG CCGCTCAACG CGGCGCTGGT GGCTGATCCG GCCTTCTCTG CCTGGCTGGA AAAACGCACC CCTGCGGGGC GCTGGGGCAA GGTCGAAGAG CTCGTCGGCG CCTGCATCTT CCTCGCCTCG GCTGCATCGT CCTTCGTCAA CGGGCACGTG CTCTATGTCG ACGGCGGCAT CACCGCCTCG CTTTGA
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Protein sequence | MAVDLFDLTG RRALVTGSSQ GIGLALAHGL SAAGAEIVLN GRDETKLARA ESAIAGSRRL AFDVTDHAAA RAAVDRFEAE IGPIDILVNN AGMQHRAPLE EFPDEAFQRL LQTNIASVFN VGQACARHMI GRRAGKIINI ASVQSALARP SIAPYTATKG AVANLTKGMA TDWAKHGLQV NAIAPGYFDT PLNAALVADP AFSAWLEKRT PAGRWGKVEE LVGACIFLAS AASSFVNGHV LYVDGGITAS L
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