Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0771 |
Symbol | |
ID | 5153417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 795020 |
End bp | 796477 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640555770 |
Product | putative cation-driven multidrug efflux pump |
Protein accession | YP_001236941 |
Protein GI | 148252356 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00132131 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTCCGAAT ACAGCCTCGC CGAAAGTTCG GTCGAGCGGG CCACACCGAA GCAAGCGGAA CGACAGCCGC GCAGCGCGTT GTCTGACGGA CCGATCCTGC GGACACTGTT GTCGTTGGCA TGGCCGAACA TCATTGCGAA CTCGGCCGGC ACCTGCGTCG TCATCGCTGA GACGTCCTAT ATCGGCCGGC TCGGCATCGA GGCGCTCGCC GCGATGGCGC TGGTCTTCCC CTTGGTGATC CTGACGATGA CCATGTCCGG CGGCGCCATG GGCGGTGGCG TCGCTTCGGC GATCGCGCGT GCGCTCGGCG CCGGCGACAC CGAGCGGGCC TCGACGCTTG CGGCGCATGC GCTGCTGATC GCGTTGTGCT TCGGTGCAAC CTTCATGGTC GGGATGCTGA TGTTCGGTCC CCGCCTGCTC CAAGTGCTTG GCGGCCGCGG TGCGGTGCTC GAACATGCCG CGGCCTACCT GCAGGTGTTC TTTGGTGGGG CCATCCTGCC GTGGCTGATG AACGCGATGG CGGGCATTCT GCGCGGCACT GGCAATATGA AGCTGCCATC GTTCATGATC CTGAACGCGG CGGTGTTGCA GATCGTGCTG GGTGGAACGC TGAGCCTGGG CCTCGGGCTC GGCATGCGCG GCGTCGCGGC CGGTGCGCTG CTCGCGTTCA GCGCCAGCAT CTCGGTGATG GGCTGGTATC TGCTCTCGGG ACGCGCCCGT GTGCGGCCGA AGCTGTACGG TCTCAAGATC AGCCGCGCGA TGTTTGCCGA TATCCTCAAG GTCGGCGCGA TCGCCTGTTT CTCGCCGCTG CAATCGGTGC TGTCGATCGC GATCTTCACG CATATGCTGG CGACGTTCGG CACGGCCGTG CTCGCCGGCT ACGGCATCGG CGCGCGCCTG GAATTCATGA TGACAACCGT CGCGTTTTCG TTCGGCATGG CCTCGGTGCC GATGGTCGGC ATGGCGGTCG GCGCCGAGCG GATCGCAAGG GCTCGCCGGA TTGCCTGGAC GGCGGCGCTC GTCTCGTTCG TCACCGTGGG GGCGCTCTCG ACCGTGATCG CGATCTTTCC GCAATTGTGG GTCGACATCT TCACGCAGGA CCCGAGCGCG CGGGCGGCGG GAGCGCATTA TCTGAGAATC GCCGCGCCGA TGTATGCCTT CATCGGTCTC GCGATCGCGC TGTATTTCGC CTCTCAGGGG GCGGCGAAGG TGATCGGCCC CGTGCTCGTG CAAACGGTGC GGCTGGTGTT CATCGCCGCG GGCGGCAGCT ATCTGCTGGC GGGCGCGGCG ACTGAAACGG GGTTCTTCCT GCTGGCAGCC TCCTCGATGG TGCTGCTCGG CGTGCTCACT CTCGCCAGCG TCATGCTGAC GCGTTGGGGG CCGAAGCCGG TGGTCGCCGA ACTGCGCCCG GCCGTCGTGG CGGCCGAGCT GAAGGGCGTT CCGCCGTCAT CGCGCTGA
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Protein sequence | MSEYSLAESS VERATPKQAE RQPRSALSDG PILRTLLSLA WPNIIANSAG TCVVIAETSY IGRLGIEALA AMALVFPLVI LTMTMSGGAM GGGVASAIAR ALGAGDTERA STLAAHALLI ALCFGATFMV GMLMFGPRLL QVLGGRGAVL EHAAAYLQVF FGGAILPWLM NAMAGILRGT GNMKLPSFMI LNAAVLQIVL GGTLSLGLGL GMRGVAAGAL LAFSASISVM GWYLLSGRAR VRPKLYGLKI SRAMFADILK VGAIACFSPL QSVLSIAIFT HMLATFGTAV LAGYGIGARL EFMMTTVAFS FGMASVPMVG MAVGAERIAR ARRIAWTAAL VSFVTVGALS TVIAIFPQLW VDIFTQDPSA RAAGAHYLRI AAPMYAFIGL AIALYFASQG AAKVIGPVLV QTVRLVFIAA GGSYLLAGAA TETGFFLLAA SSMVLLGVLT LASVMLTRWG PKPVVAELRP AVVAAELKGV PPSSR
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