Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0768 |
Symbol | metZ |
ID | 5153556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 789076 |
End bp | 790284 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640555767 |
Product | O-succinylhomoserine sulfhydrylase |
Protein accession | YP_001236938 |
Protein GI | 148252353 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | [TIGR01325] O-succinylhomoserine sulfhydrylase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00770297 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.00215966 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCGAAGT CCCCCGCGAA GGCGCCCGCG TCGTTCGCCC AATATCGCCC CGAAACCCGG CTGGTGCATT CCGGCAGCTT GCGTTCCGAA TTCGGCGAGA CCGCCGAGGC GCTCTACCTG ACGCAAGGTT TCGTCTACGC CACCGCCGAG GAATGCGAGG CGCGCTTCAA GGGCGAGGAT CCCGGCTTCA TCTATTCGCG CTTTTCCAAC CCGACCACGG CGATGTTCGA GCGCCGCATG ATCGAGCTCG AAGGCGCCGA GGCCTGCCGT TCCGCGGCCA CCGGCATGGC TGCAGTGACC ACCGCGATCC TGGCCCCGCT GCGCGCCGGC GACCACGTCG TTGCCGCGAA GGCGCTGTTC GGCTCCTGCC GCTACGTCGT CGAGGACCTG CTGCCGCGCT ACGGCATCGA GTCGACGCTG GTCGACGGGC TCGATCTCGA CCAGTGGCAG AAGGCGGTCC GGCCGAACAC GAAATCGTTC TTCCTGGAGA GCCCGACCAA TCCGACGCTC GACGTGATGG ACATTCCGGC GATCGCCGAG ATCGCGCATG CCCACGGCGC GCGGCTGATC GTCGACAATG TGTTCGCAAC GCCGATCTGG CAGAGCCCGC TCGCGCTCGG CGCCGATGTC GTCGTGTACT CCGCGACCAA GCATATCGAC GGTCAGGGCC GCTGCCTGGG CGGCGTGATC CTGTCGTCGG AGGCCTTCAT CGCCGAACAC ATCCACAATT TCATGCGCCA GACCGGCCCG TCGATCTCGC CCTTTAACGC CTGGGTGCTG CTCAAGGGCC TGGAGACGCT GGCCGTCCGC GTTCGCGCGC AGACCGAGAA CGCGGCGAAG GTTGCGGATT TTCTCGCGAC GCATCCGAAG ATCTCGCGGC TGATCTATCC GGGCCGCGAG GACCATCCGC AGGCCGCGAC CGTCAGGAAG CAGATGCGCG CCGGCTCGAC CCTGGTCGGC TTCGAGGTCA AGGGCGGCAA GGCCGGCGCG TTCCGCACGC TTAACGGCCT CAAGCTCGCG CGCATCTCCA ACAATCTCGG CGACTCCAAG ACGCTGGTCA CGCATCCCGC GACGACGACG CATCAGCGGC TGTCGCCGGA GGCGCGCGCC GAACTCGGCA TCAGCGAAGG CTTCATCCGC TTCTCCGCAG GCCTCGAACA TGCAGACGAC CTGATCGCGG ATCTCGACGC CGCCCTGGGG GCGGCGTAG
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Protein sequence | MSKSPAKAPA SFAQYRPETR LVHSGSLRSE FGETAEALYL TQGFVYATAE ECEARFKGED PGFIYSRFSN PTTAMFERRM IELEGAEACR SAATGMAAVT TAILAPLRAG DHVVAAKALF GSCRYVVEDL LPRYGIESTL VDGLDLDQWQ KAVRPNTKSF FLESPTNPTL DVMDIPAIAE IAHAHGARLI VDNVFATPIW QSPLALGADV VVYSATKHID GQGRCLGGVI LSSEAFIAEH IHNFMRQTGP SISPFNAWVL LKGLETLAVR VRAQTENAAK VADFLATHPK ISRLIYPGRE DHPQAATVRK QMRAGSTLVG FEVKGGKAGA FRTLNGLKLA RISNNLGDSK TLVTHPATTT HQRLSPEARA ELGISEGFIR FSAGLEHADD LIADLDAALG AA
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