Gene BBta_0712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0712 
Symbol 
ID5152505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp731129 
End bp733132 
Gene Length2004 bp 
Protein Length667 aa 
Translation table11 
GC content65% 
IMG OID640555713 
Productputative sensor histidine kinase 
Protein accessionYP_001236885 
Protein GI148252300 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGCGGG CTGTGCCGAT CCGTTGGCGT ATCCTGTCCA TTGCCGCCCT CAACTCCGCT 
GTCGTGATCG TCCTCGCGGC GCTGATCTGG AACGGAGCGA AGGTGCTGGG AACCGCCTGG
GACGATGTCC GCCAGGTCCG CGAATCCGAC AAGGTGCTGG CACTGCTGGA AAGCGAGACC
AGCCGGCTGC AGAACCTCAT TCACCGCTAC ATCAATCAGC CGAGTCCAGA GCTGTTCGCC
GAGATCCTGC TCTTGCGCGA GGCGGTGCTG GGCACCCTCA CCACGCGCGC GTCGACCGAC
CCGATGCTGT CGGGATCGGC CGAAGAGCTC GAACGCGTCA CGGTGCGCTT TCTCGACGGT
TTCGGCGAGT TGCGCAGCCT GCAGGCGACG ATTGCCAAGA CCTATGACGA GGAGGTGCTC
GGTCCCGCCC GAGACATCGC CGGGCTCTAT TCGGTGATCG AAGGCGCGAC CGGTCATCGC
GACGCGCAGA TCTGGCCATC GCTCGGCAAG TCGCGGGAGG CCTTCACCGC GATGCTGGTC
GCGGCCAATT CCTACTACCT CTCGCTGGCC CCGGCGTCGG CGGAGGATGC GCGCCGCAAC
ACCGAGACGA TCGAGAAGAC CATTCCGGTG ATGTCGGAGC TTGCCGACAA CGACCTGCAG
CGCCTTGCGC TGCAGCGGCT GTCGGCCCGT ACCGCGGCGC TCCGGGAAGG CTTTTCCAAG
CTGACCGGAC AGCTGACCAA TCGCACGGAA TTGCTGCGCA ACACCATCGA CGCCAGTCAG
GCCGAAACCA TCGCCGCCAT CGACGGCCTG TCGGTGAAGA TGCGGCAGCA TGAGCAGAAG
GCCCAGGCGA CCTTCGATCG GACATTGAGC GATATTTCCC GACGCGTGCT GTCGATCGCG
GTGATCTTTC TCGGCATCAT CCTGTCCGCA GGCGTGCTGA TCGCACTCTC GATCCGCCTG
CCGTTGCAGC AGATCATGGC GTCGATGCGC GCGATCACCA TCGGCGACTA CGACCGAAAG
GTTCAGGGCA CCGAGGCGCG CGACGAGGTC GGTTCGATGG CCCGCGCCGT CGAGATCTTC
CGCCAGAACG CGATCGCCAA GCGCAAGACC GAAGACGAGC TGCGCAACGC GAAGGAGAAG
GCCGAGAGCG CCCTGCTCGA GCTCAATGCC GCGCAACGGA ATTTGATCGA TGCCGAGCGC
CTCGCGGCGC TGGGAGGGCT GGTCGCCGGA GTGGCGCATG AGGTGAACAA TCCGATCGGC
ATCAGCCTGA CGGTGGCCTC CAGCTTTGCG CGCCGGGCGG AGATGTTCGA AGCGATGCTG
AAGTCGCCGG AGGGCGGCCT GCGGCGATCG CAGCTCGAGG AATTCGTGCG CTCCTCGCGC
GACGCGTCCG AACAGCTGGT CGCCAACCTG CAGCGCGCCG GCGAGCTGAT CCAGTCGTTC
AAGCAGGTCG CCGTCGACCG TTCGCATGCC GAGCGACGGA CTTTCATGCT GGGCGAGGCC
ACCGACCAGA TCATCACGAG CCTGAAGCCG GTCCTCAAGC GGGCGGCGAT CACGCTTGCG
GTCGACGTGC CCGAGGGGCT GCCGATCGAC GGCTATCCGG GGTCCTATGG CCAGATCCTG
ACCAATCTGT TTCTCAACGC GGTCAACCAT GCCTTCGCCG ACGGCCGCGC CGGCACCATC
TCGATCACCG CGCGGCCGCG CGGCGCAGAT GACATCGAGA TCATTTTTGC CGATAACGGC
GCCGGCATGA CGCCCGACGT GCAGCGCCAA GCCTTCGATC CGTTCTTTAC CACGCGCCGG
AATGAAGGCG GGACGGGGCT CGGGCTGCAT ATCGTCTACA ATCTGGTAAC GCAGCAGCTC
GGCGGCCGCA TGATGCTGGA GTCCCGGGTG GGACAAGGCA CCACCTTTCG GATTACCATG
CCGAGGGTCG CCAAGGGCGG CGCCGAGACA GCAATAGGTG ACGGAACGAC GCAATGGCCG
AACAGGACGA TGTCCTCCAC CTGA
 
Protein sequence
MLRAVPIRWR ILSIAALNSA VVIVLAALIW NGAKVLGTAW DDVRQVRESD KVLALLESET 
SRLQNLIHRY INQPSPELFA EILLLREAVL GTLTTRASTD PMLSGSAEEL ERVTVRFLDG
FGELRSLQAT IAKTYDEEVL GPARDIAGLY SVIEGATGHR DAQIWPSLGK SREAFTAMLV
AANSYYLSLA PASAEDARRN TETIEKTIPV MSELADNDLQ RLALQRLSAR TAALREGFSK
LTGQLTNRTE LLRNTIDASQ AETIAAIDGL SVKMRQHEQK AQATFDRTLS DISRRVLSIA
VIFLGIILSA GVLIALSIRL PLQQIMASMR AITIGDYDRK VQGTEARDEV GSMARAVEIF
RQNAIAKRKT EDELRNAKEK AESALLELNA AQRNLIDAER LAALGGLVAG VAHEVNNPIG
ISLTVASSFA RRAEMFEAML KSPEGGLRRS QLEEFVRSSR DASEQLVANL QRAGELIQSF
KQVAVDRSHA ERRTFMLGEA TDQIITSLKP VLKRAAITLA VDVPEGLPID GYPGSYGQIL
TNLFLNAVNH AFADGRAGTI SITARPRGAD DIEIIFADNG AGMTPDVQRQ AFDPFFTTRR
NEGGTGLGLH IVYNLVTQQL GGRMMLESRV GQGTTFRITM PRVAKGGAET AIGDGTTQWP
NRTMSST