Gene BBta_0684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0684 
Symbol 
ID5151450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp698957 
End bp700039 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content68% 
IMG OID640555686 
Producthypothetical protein 
Protein accessionYP_001236858 
Protein GI148252273 
COG category[R] General function prediction only 
COG ID[COG5621] Predicted secreted hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.270101 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.611025 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCGCTA GAGCCACCTT GACGCGACGC CACCTGATCG GCGGGCTCGG CCTGCTGGCG 
CTGCCGCGCC TTGCGCGGGC ACAGGGCTTT GCGGGTCTGA GCGATAGCGC GGACGGCTTT
ACGCCGGTCA GGCCGGGCAA GGCCTTCAGC TTCCCCGCCG ACCACGCTCC CCATGACGAT
TTCCGCATCG AATGGTGGTA CGTCACCGCC AATCTCAGCG ACGCCGGCGG CAGGGCCTAC
GGCCTGCAAT GGACGCTGTT CCGCTCAGCG GCGCGGCCCG GGCCGCAGGC CGAAGGCTTC
GACAATCAGC AGCTCTGGAT GGCGCATGCG GCGGTGACGC GCGCCGACAG CCACCGCTCG
ACCGAGAAAT TCGCGCGCGG CGGCATCGGC CAGGCCGGCG TCGAGGGCAA GCCGTTCCAG
GCCTGGATCG ACGACTGGCA GCTGCGCGGC ACCGGCGCAA CTGATGATCA GACGCTGGCC
CCCCTCGACA TGACGGCGAG TGCGGCCGAC TTCTCCTATG CGCTGCATCT GGAGGCGGAC
CGTCCGGTGG TGCTGCAGGG CATCGACGGC TACAGCCGCA AATCCGAGCG CGGCCAGGCG
TCCTACTATT ACAGCCAACC CTTCTATCGC GCGCGCGGCC GCATCATCTT CGACGACACG
CCGGTCGAGG TCACAGGGAT GGCCTGGCTC GACCGCGAAT GGAGCAGCCA GCCGTTGGCG
TCCGACCAGA GCGGCTGGGA CTGGTTCGCG CTGCATTTTG CGGGCGGCGA GAAGTTGATG
CTGTACCGGA TGCGGCAGGG AAACGGCGAC TACACGTCGG GCACCTGGAT CACCGCCGAC
GGCGCCGCGC GTCAGCTCGG TCCCGACGGC ATCGCGATGA GGTCGACGGA GACGGTCGCG
ATCGGCGAGC GCAAACTGCC GGTCGGCTGG CGCGTCGAGA TTGCGGCGCT CGGCATTGCG
ATCGACACCG CCCCGCTCAA TCCGAAGGCC TGGATGGGCA CGCGCGTTCC GTATTGGGAG
GGGCCGATCA GCTTCAGGGG CAGCCACAGC GGGGTGGGCT ATCTCGAGCT GACCGGATAT
TGA
 
Protein sequence
MSARATLTRR HLIGGLGLLA LPRLARAQGF AGLSDSADGF TPVRPGKAFS FPADHAPHDD 
FRIEWWYVTA NLSDAGGRAY GLQWTLFRSA ARPGPQAEGF DNQQLWMAHA AVTRADSHRS
TEKFARGGIG QAGVEGKPFQ AWIDDWQLRG TGATDDQTLA PLDMTASAAD FSYALHLEAD
RPVVLQGIDG YSRKSERGQA SYYYSQPFYR ARGRIIFDDT PVEVTGMAWL DREWSSQPLA
SDQSGWDWFA LHFAGGEKLM LYRMRQGNGD YTSGTWITAD GAARQLGPDG IAMRSTETVA
IGERKLPVGW RVEIAALGIA IDTAPLNPKA WMGTRVPYWE GPISFRGSHS GVGYLELTGY