Gene BBta_0680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0680 
Symbol 
ID5151889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp694571 
End bp695320 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content69% 
IMG OID640555682 
Producthypothetical protein 
Protein accessionYP_001236854 
Protein GI148252269 
COG category[R] General function prediction only 
COG ID[COG0517] FOG: CBS domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.480825 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCTC ATCAGATCAT GACGAGATCG GTCATCACCG TGACGCCGGG AACCCCGGTG 
GCCGAGGCGG CGCGGATCAT GCTCCGCAAT CACATCGGCG GACTGCCGGT GGTCGATGCC
GCGGGGCGAC TGGTCGGCAT GGTCACCGAT GGCGACTTCC TCCGTCGGGC CGAGCTCGGC
ACCGAGCGGA AGCAGGGCCG CTGGCTCGAC CTCCTGGTCG GACGCGGCCG CATCGGCGCC
GATTTCGTCC ATTCCCATGG CCGCACCGTC GGCGACATCA TGAGCCGGCC TGCGGTCACA
GTCAGCCCCG ATGCGAGTCT CGCCGAGATC GCCGCGATCA TGGAGAAGCG CAGCATCAAG
CGCCTGCCGG TCGTCAGCGG CGAGCAACTG GTCGGCATGG TCACTCATAC CGACTTCGTC
CAGACCCTCG CCGATCTCGC GACGGCGGTG CCGGGCCCCA CCCCCGACGA TGACGGGCTC
CGCACGGCCA TCCTCGACGC GCTCGACCAG GCCGCCTGCA AACACTGCCG CTTCAATGTC
GTCGTCCGCA ACGGCGTCGC GCATCTCACC GGTGCGGTGC GCAACGACCA GGAGCGGGCA
ACCGCGATCG TGGCGGCCAA GAGCGTTCAG GGCGTCCGCG ACGTGCGTGA CCATATGTGG
GTCTACCCGC CGCCGGAGGA GGAGTTCGGC GGCGGCGATA TCGTCTCGCT GCAGGATCAG
CCGTCGACCG ACGACGACCA GCCGCTGTGA
 
Protein sequence
MRAHQIMTRS VITVTPGTPV AEAARIMLRN HIGGLPVVDA AGRLVGMVTD GDFLRRAELG 
TERKQGRWLD LLVGRGRIGA DFVHSHGRTV GDIMSRPAVT VSPDASLAEI AAIMEKRSIK
RLPVVSGEQL VGMVTHTDFV QTLADLATAV PGPTPDDDGL RTAILDALDQ AACKHCRFNV
VVRNGVAHLT GAVRNDQERA TAIVAAKSVQ GVRDVRDHMW VYPPPEEEFG GGDIVSLQDQ
PSTDDDQPL