Gene BBta_0664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0664 
Symbol 
ID5150910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp672215 
End bp674482 
Gene Length2268 bp 
Protein Length755 aa 
Translation table11 
GC content68% 
IMG OID640555666 
Producthypothetical protein 
Protein accessionYP_001236838 
Protein GI148252253 
COG category[R] General function prediction only 
COG ID[COG2425] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain 
TIGRFAM ID[TIGR01167] LPXTG-motif cell wall anchor domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.101783 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGA CGATCGACTA CGACATCCGC CGCAGTGCCC ATCCGATCCG GTCGTGGATC 
GTGACCATGC TGCTGTTCCT GTTGCTGCAG GCCGCCGCGG TGCTGCTGGT CGGCTTCACG
GCGCTGTTTC TCAGCATCAC GCCGGGTTGG TCGGCCGAAG GCCCGCCAGC TCCGCTGACC
AAGCCGCGCG ACGCGCGCTC CGGCGCGCTG CTGTTCAAGT CCGACGCGGG CTATGCCGAG
GCGCCGCGGC TCGGCATCGA TGTCGACATC ATCGTCTCCG GCCCAACGGC GCGGGCGCGC
GTGACGCAGC TGTTCAGGAA CACGAGCTCG CAATGGATGG AGGCGGTCTA TGTCTATCCG
CTGCCGCCGG ATAGCGCGGT CGATACGCTA AAGATGATCG TCGGCGATCG CGTCGTGATC
GGCGACATCA AGCCGCGCGA GCAGGCCAAG GTGATCTACG AGCAGGCCAA GCGCGACGGC
AAGACCGCCG CGCTGACCGA GCAGGAGCGG CCGAACATCT TCACCAACTC GCTCGCCAAT
ATCGGCCCCG GCGAGACCGT GCTGGTGCAG ATCGAATATC AGCAGCCGGT GGCGCAGGTG
GATGGCGCGT TCTCGCTGCG GGTGCCGTTG GTCGTCGCGC CGCGCTACAA TCCCGCGCCG
ATCGTGCAGA GCGTCGACCT GCGTCCCGGC AGCGATGGCT GGAGCGCCGC AAGCAATGAT
CCGGTGCCGG ACCGCGACCG CATCTCGCCG GAGGTGCTCG ACCCCGCCAA GACCGATCCG
GTCAATCCCA CCAAGATCAC AGTGCGGCTG CAGGCCGGAT TCGCGCTCGG CGAGGTCAAG
AGCCATCATC ACCAGGTGAC GATCGACAGC CCCGATGCGA AGACGCGGAT CGTGACCCTG
GCCGAGGGCG TGGCGCCGGC CGATCGTGAT TTCGAGCTGA CCTGGAAGCC GGCTTCTGTC
GCCATGCCGT CGGTCGGCCT GTTTCACGAG CAGGTCGGCG ATGCCGATTA TCTGCTCGCC
TTTATCACGC CGCCGGCGGT CGCGGCGTCA GCGCAGCGCC CGCAGCCGCG CGACGTGATC
TTCGTGATCG ACAATTCCGG CTCGATGGGC GGCACCTCGA TCCGCCAGGC CAAGGCCAGC
CTGCTTTATG CGCTGGGACG GCTGCAGCCC AATGACCGCT TCAACGTGAT CCGCTTCGAC
GACACGATGA CGGTGCTGTT TCCATCCTCG GTGCCGGCCG ACGCTGAACA TGTCGGCAGC
GCGACCAGCT TCGTGAGCGC GCTCGAGGCG CGCGGCGGCA CCGAGATGGT GCCGGCGATG
CGTGCGGCGC TCACCGACGA CGGCAGCGAC AGCGACCGCG TGCGCCAGGT GGTGTTCCTG
ACCGACGGCG CCATCGGCAA CGAGCAGCAG CTGTTCGAGA CCATCACGGC GATGCGCGGC
CGCTCGCGCA TCTTCATGGT CGGCATCGGC TCGGCGCCCA ACACCTACCT GATGACGCGC
GCCGCCGAGC TCGGCCGCGG CGCCTTCACC CCTATCGGCT CGGTCGAGCA GGTCGAGGAG
CGCATGCGTG ACCTGTTCGC CAAGCTGGAG AATCCGGTCG TGACTGGCCT GACCGCCACG
TTTTCCGAAG CCTCCGCCGA CCTCACACCG GCTGTGCTGC CGGACGTCTA TCGCAATGAG
CCGCTGGTGC TGGCCGCCAG GATCGACCGT CTCGCCGGGT CGCTGCAGCT CAAGGCGCGG
ATCGGCGATC AGCCATGGAC CATCACGCTG CCGCTCGCCG GCGCCGCCGC GGGCAAGGGC
CTGTCAAAAC TGTGGGCCCG GCGCAAGATC GGCGATGCCG AAGTGGCGAA GACGATGCGC
CAGATGACGC CGGAAGAATC CGATGGCGCC ATTCTCAGGC TGGCGCTGGA CCATCAGCTG
GTCACGCGCC TGACCAGCCT CGTCGCCGTC GACAAGACCC CGCGGCGCCC CGACGGCGAG
CCGCTCAAGC TCGCCGAGCT GCCAATCAAC CTGCCGGCCG GCTGGGACTT CGAGAAGGTG
TTCGGCGAGC GCAGCCGGAT GCCGGGCGTG CCGAAGGAGC GCCGTGCCGA AGCGGATGGC
GACGTCCAGT TCGCCGCGCT GAAGCGGCCG GTCGTGCCGA CGGCGCCGGC CACAATCACC
CTGCCGAAGA CGGCGACGAA TGCCGAGCTG AGCATGCTGC TGGGGCTCGG AATCCTGATG
CTGGAACTGA TTTGGCTCAT CGCTATCCGG CGACGGACAG CCAACTAA
 
Protein sequence
MSETIDYDIR RSAHPIRSWI VTMLLFLLLQ AAAVLLVGFT ALFLSITPGW SAEGPPAPLT 
KPRDARSGAL LFKSDAGYAE APRLGIDVDI IVSGPTARAR VTQLFRNTSS QWMEAVYVYP
LPPDSAVDTL KMIVGDRVVI GDIKPREQAK VIYEQAKRDG KTAALTEQER PNIFTNSLAN
IGPGETVLVQ IEYQQPVAQV DGAFSLRVPL VVAPRYNPAP IVQSVDLRPG SDGWSAASND
PVPDRDRISP EVLDPAKTDP VNPTKITVRL QAGFALGEVK SHHHQVTIDS PDAKTRIVTL
AEGVAPADRD FELTWKPASV AMPSVGLFHE QVGDADYLLA FITPPAVAAS AQRPQPRDVI
FVIDNSGSMG GTSIRQAKAS LLYALGRLQP NDRFNVIRFD DTMTVLFPSS VPADAEHVGS
ATSFVSALEA RGGTEMVPAM RAALTDDGSD SDRVRQVVFL TDGAIGNEQQ LFETITAMRG
RSRIFMVGIG SAPNTYLMTR AAELGRGAFT PIGSVEQVEE RMRDLFAKLE NPVVTGLTAT
FSEASADLTP AVLPDVYRNE PLVLAARIDR LAGSLQLKAR IGDQPWTITL PLAGAAAGKG
LSKLWARRKI GDAEVAKTMR QMTPEESDGA ILRLALDHQL VTRLTSLVAV DKTPRRPDGE
PLKLAELPIN LPAGWDFEKV FGERSRMPGV PKERRAEADG DVQFAALKRP VVPTAPATIT
LPKTATNAEL SMLLGLGILM LELIWLIAIR RRTAN