Gene BBta_0661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0661 
Symbol 
ID5150907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp669839 
End bp670660 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content66% 
IMG OID640555663 
Producthypothetical protein 
Protein accessionYP_001236835 
Protein GI148252250 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.350173 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCGA TCAATCTCAT TGTTGGAACC CTGACGATCG CGGCGGTGGC GGCTGGCATC 
AGCGGCCTGC TGATCAAGCA GAAGTCGCGC ATCGCCCAGC AGCGCAGCGT GATGCGGGTG
GTGTTTGACG GCGGCTCGGC GGCCGGCCTG CGCAAGGGCG GCCCGGTCAA TTTCGACGGC
GTGCAGGCCG GACAGATCCT CTCGATCAAT CTCGAGAGTC CGCGCCGGAT CGTCGCCATG
ATCACGCTCG ACAAATCCGC GCCGATTCGC AAGGACACCA CGGCCGGCAT CGAGTTCCAG
GGACTCACCG GCATCGCCGC GATCTCGCTG GTCGGCGGCG CACCGACGGC GCCGCCGGTG
CCGCTCGATC ACGACGGCGT GCCGGTGCTG ACAGCCGATC TCAAGGACCA GGAGACGATG
GTCGAGACGG TGCACAACAT CGATAAATAC GTCGTCAGCA ACGCCCCGGC GATCAAGGAG
GCGCTGCAGA GCTTCCAGTC CGAAACCGCC GCGCTGCAGG AGAAGACGGC AGCAATCGAC
GCCGCGATCG ACAAGGCCGA GGACATCTTC AAGGGCTTCG ACACCCTGGT GACCAAGATC
GACGGCACCA TTCCCGGCTT CGCGGACGGC AATCCCGGCC AGCTGTTCGA CCAGATCAAG
TCGATGCGCG AGCTCGTCGA CAGCTTCAAG CGCAAATCCG CCAAGGTGAT CGACGACAGC
CGTAAGACGC TGGTCGACAT CAGCGACGGC GCGAATGCGA TGAGCGCCAA GTTCGGCGGG
CAGCCCGCAC CGGGACCGCG CCGCGTGCCC GCGTCACGCT GA
 
Protein sequence
MRAINLIVGT LTIAAVAAGI SGLLIKQKSR IAQQRSVMRV VFDGGSAAGL RKGGPVNFDG 
VQAGQILSIN LESPRRIVAM ITLDKSAPIR KDTTAGIEFQ GLTGIAAISL VGGAPTAPPV
PLDHDGVPVL TADLKDQETM VETVHNIDKY VVSNAPAIKE ALQSFQSETA ALQEKTAAID
AAIDKAEDIF KGFDTLVTKI DGTIPGFADG NPGQLFDQIK SMRELVDSFK RKSAKVIDDS
RKTLVDISDG ANAMSAKFGG QPAPGPRRVP ASR