| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0656 |
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| Symbol | |
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| ID | 5150724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 665324 |
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| End bp | 666463 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640555658 |
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| Product | branched chain amino acid ABC transporter permease |
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| Protein accession | YP_001236830 |
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| Protein GI | 148252245 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.370011 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCATCA ACTCGCGCTT TTTCAACCGA TCAGAACTCA TCGGCTTCGT CTCGCTGCTG
CTCCTGCTCG TCGTCATCCT GCCCCTGGCG CTGGATGTGT TCCGCCTGAA CCTGGTCGCG
AAATATCTGA CCTATGCCTT CGTCGCGATC GGCCTGGTGC TGTGCTGGGG CTATGGCGGC
ATTCTCAGCC TGGGGCAGGG CGTGTTCTTC GGCCTTGGCG GCTACTGCAT GGCGATGTTC
CTGAAGCTGG AGGCCTCAAG CGTCGCCAAC ACCAAGATCC AGTCGACGCC TGGCATCCCC
GACTTCATGG ACTGGAATCA GCTGACCCAG CTGCCGTTCT TCTGGAAGCC GTTCCAGAGT
TTTCCATTCG CGCTTGCGGC AATCATCCTG GTGCCGGCGA TCTTCTCCTT CATCATCGGC
GCGGCGATGT TCAAGCGGCG GGTCGGCGGC GTCTACTTCG CGATCATCAC CCAGGCCATC
GCGGCCATCA TGACGATCCT GATCGTGGGA CAGCAGGGTT ACACCGGCGG CATCAACGGC
ATTACCGACC TCCGCACCTT GCACGGCTGG GACATCCGTA CCGATCATGC CAAGTACATC
CTCTATTTCG TCGAGGTGTT CTTCCTGTTC GTCGCCATCC TGGTGGCGCA GTTCATCCGC
CTGACCAAGC TCGGCCGTAT CCTGGTGGCG ATGCGTGAAC AGGAGGATCG CGTGCGCTTC
TCCGGCTATA GCGTCGCCAA CTTCAAGATC TTCGCCTTCT GTGCGGCGGC GGTCTTTGCC
GCGGTCGGCG GCGCGCTGTT CACCCTCGAG GTCGGCTTCA TGTCGCCGTC CTTCGTGGGC
ATCGTGCCCT CGATCGAGAT GGTGATCTAC ACCGCGGTCG GCGGCCGGCT GTCGATCTTT
GGCGCGGTCT ACGGCTCGCT GCTGGTCAAC TTCGCCAAGA CCAGCCTGTC GGAGACCTTC
CCGCAGCTCT GGTTGTTTGG CCTCGGCGCG CTCTTCATCG CGGTCGTCCT CGCTTTCCCG
AACGGTCTCG CCGGCATCTG GGGCGATTAT GTGCAGCCGC GCATCGACCG GCTGCTGGCG
TCGCGCAGCA AGAAATCCGG CAATGGCGGC CTTGTCGCCA ACGGCGCCCC CGCAGAGTGA
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| Protein sequence | MIINSRFFNR SELIGFVSLL LLLVVILPLA LDVFRLNLVA KYLTYAFVAI GLVLCWGYGG
ILSLGQGVFF GLGGYCMAMF LKLEASSVAN TKIQSTPGIP DFMDWNQLTQ LPFFWKPFQS
FPFALAAIIL VPAIFSFIIG AAMFKRRVGG VYFAIITQAI AAIMTILIVG QQGYTGGING
ITDLRTLHGW DIRTDHAKYI LYFVEVFFLF VAILVAQFIR LTKLGRILVA MREQEDRVRF
SGYSVANFKI FAFCAAAVFA AVGGALFTLE VGFMSPSFVG IVPSIEMVIY TAVGGRLSIF
GAVYGSLLVN FAKTSLSETF PQLWLFGLGA LFIAVVLAFP NGLAGIWGDY VQPRIDRLLA
SRSKKSGNGG LVANGAPAE
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