| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0653 |
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| Symbol | |
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| ID | 5150721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 659304 |
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| End bp | 662678 |
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| Gene Length | 3375 bp |
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| Protein Length | 1124 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640555655 |
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| Product | sensor histidine kinase |
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| Protein accession | YP_001236827 |
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| Protein GI | 148252242 |
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| COG category | [F] Nucleotide transport and metabolism
[K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG1457] Purine-cytosine permease and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.450749 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.469118 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAGGGC GGCAGCGGAT CGACCGCGTC AGGCGCCAGT ACAACCAGTG GGTCGCCAAC
CAGACGTTGG AGGACTACGC ACTTCGTTTC ACGGCCAAGA GCGCGCGGCG CTGGTCCGCC
GCCCGCGTGG CCAACACCGC GCTGGGCGCG ATCTCGTTCC TGGCGCTGGA GGCGATCGGA
GGCACCATCA CGCTGAACTA TGGCGTGACC AACGCCACCG CGGCGATCCT CATCGCCAGC
GTCATCATCT TCTGCTGCGG CCTGCCGATC GCCTATCATG CCGCCAAATG CGGCATCGAC
ATCGACCTGC TGACGCGCGG TGCCGGCTTC GGCTATATCG GCTCGACCGT GACGTCGCTG
ATCTATGCGT CGTTCACCTT CATCTTCTTC GCGATCGAGG CGGTCATCCT GGCGTCTGCG
CTGGAGATGT GCTTCGGTAT CCCGCGGCCG GTCGGCTACC TGATCAGCGC GGTCGTCATC
ATTCCGCTCG TCACCTATGG CATCACGCTG ATCAGCCGGT TCCAGCTTTG GACCCAACCG
CTATGGGTCG TGCTGCACAT CCTGCCGTTC GCGGCGATCG CCTATGCGAG CCCGCACTCC
TTCGCCGAAT GGCAGCAGTT CCCGGGCGAG CATGGCGATC CGGCCGGGCA TCTCGACCTG
GCGCTGTTCG GCACGGCCGC GGCCGTGGTG TTTTCGCTGG TCGCCCAGAT CGGCGAGCAG
GTCGACTTCC TGCGCTTCCT GCCGCGCGAC CGCCGCACGT CCAGCCGGTC TTGGTGGATC
GCGCTGCTCT CGGCTGGCCC GGGCTGGATC GTGCTCGGCG CGCTCAAACT GCTGGCGGGG
TCGTTCCTCG CCTTCTTCGC CCTGAGCCAC GGCGTGTCGG CAGAGCGCGC CGCCGAGCCG
GCGCACATGT ACCTCGAGGC GTTCCGCTAC GTGCTGGCGC AGCCGGACCT CGCCCTCGCC
TTGACCGGCA CCTTCGTGAT CCTGTCGCAG ATCAAGATCA ACGTCACGAA CGCCTACGCC
GGTTCGATTG CCTGGTCGAA CTTCTTCTCA CGGCTGACCC ACAGCCATCC CGGCCGCGTG
GTGTGGTTGG TGTTCAACGT CGTCGTGGCG CTGCTGTTGA TGGAGATCGG CGTCTACAAG
GCGCTCGAGC AGACGCTGGC CCTGTACTCC AACATCGCGA TCTCGTGGGT CGGCGCTCTC
GTGGCCGACC TCGTGATCAA CCGGCCGCTC GGGCTGCGGC CGCCGCAAAT GGAGTTCAAG
CGCGCTCACC TGTACGACAT CAATCCGGTC GGCGTCGGCG CCATGACCAT GGCGACCATC
GTCTCGATCA GCGCCTTCTA CGGTCTGTTC GGGCCGACCG GAAAGGCGCT GTCGACCTTC
GTCGCGCTCG GCGTTGCGCT CGTCACCGCC CCGGCGATCG CCTATCTGAC AGACGGGAAA
TACTACCTGG CACGCAAGCC GAAGCGGAGC TGGCAGAACA TCGAGCAGAT CCAATGCTGC
ATCTGTGAGC ATCATTTCGA GCCAGAGGAC ACCACCTCCT GCCCGGCCTA TGCCGGCCCG
ATCTGCTCGC TCTGCTGTTC GCTGGACGCA CGCTGCCACG ATCTTTGCAA GCCGCATGCG
CGCGCGCAGG CGCAGGTCGC CGCGGCGCTC AGCGGCATGC TGCCGCAATC CGTGCTGGCC
AAGATCAACT CGCAGTTCGG GCATTATGTC GGCGTGTTTC TGACCTCCGC CGGGCTGGTC
GCGCTGACGC TCGGCATGAT CTATCTGGAA ACATCCGCCG CATTGCCCGG CTTCAAGGGC
ATCATCTCCG ACGTTCTCTG GAAGGTGTTC TTCGCCCTCT CCATCATCAT CGGTGTCGTG
ACCTGGCTGT TCGTGCTGGC GCAGCAGAGC CGCCGTGCGG CCGAGGCCGA GACGCGGCGC
CAGACCCAGC TCTTGATCCA GGAGATCGAA GCCCACAAGC GCACCGATGC CGAACTGCAG
CGCGCCAAGG AGGTGGCGGA ATCGGCGAAC CTCGCCAAGA GCCGCTACGT GGTCGGACTC
AGCCACGAAC TACGCTCGCC GCTGAACGCG ATCTCCGGCT ATGCGCAGCT GCTCGAGCAG
GATACGAGCC TCGCGCCGAA GCCGCGCGAC CAGGTCCGTG TCGTCCGGCG CAGCGCCGAT
CATCTCTCTG GACTGATCGA CGGCATTCTC GATATCTCGA AGATCGAGGC CGGACGGCTG
TATCTGTCGC GCGACGAGGT GCGTCTCAGC GAGTTCCTCG ACCAGCTCGT CGGCATGTTC
CGGCTGCAGG CGGCAGCGAA AGGTATCGAT TTCGTGTTCA AGCGTCCGGC CGTGCTGCCG
CTTGTGGTCT ACGCGGACGA GAAACGGCTT CGGCAGATCC TGATCAACCT GTTGTCGAAT
GCGATCAAGT TCACCCAGGA AGGCAGCGTC CAGTTCGTCG TCCACTACCG CAGCCCCGTC
GCCGAATTCG AGGTGATCGA TACTGGCCCC GGCATTCAGC CCGATGACCT GGAACGTATC
TTCGCTCCGT TCGAGCGCGG CGCGCTCGGT GCGGCGCAGC CGCAAACGGG CACCGGCCTC
GGCTTGACCA TCAGCCGGCT GCTCGCCGGC GTGATGGGCG GCGACATCAA GGTGGAAAGC
AAGGTCGGTC TCGGCAGCAC GTTCAAGGTG AAGATCCTGC TCTCCGAGGT GACCAATCCG
ACGCGGCACG CGCCTGTGAA GGCGCCGGTC GCGGGTTATC TCGGCCCACG CAAGACCATC
CTGATCACCG ACGACGATCC CGTCCACCGC GACCTGCTGC GAGAGGTGTT GACCCCGCTC
GGCTTCATTC TGCTCAGCGC ACCCGACGGG CCGTCCTGTC TGGCATTGGC GCAGCACTGC
CAGCCGGACC TGTTCATCCT GGACATCTCG ATGCCCGGCA TGGACGGCTG GACCGTCGCC
GAGACCTTGC GCAGCAGCGG CCATCATCAG GCGCGCATCC TCATGACATC GGCGAGCGCG
CTCGAGGCTC ATGGACGCCC GCTGGCGCAG CCGTTCCATG ACAGCTATCT GATGAAGCCA
ATCGACATTC CGCGGCTGTT GGAGGCAATC CGACAATTGC TGAAGCTCGA TTGGAGCTAT
CAGACCGACA TTCCCGTGGC ACAGCCGCGC TGGCGGCCGG AAACCGGATC ACGGCCGCCG
CCGAGATATG TCGAGGAGCT GATGGGCCTC GGCCAGATCG GCTATATCAG GGCCATTCAG
CTCAAGCTTG ACGAGATCGG CAGCGCGCAC CCCGAGCATG CCGACTTCGT CGCCCAGATG
CGCACGCTGA TCGACCGTTT CGACCTCGAT CAGTACATGG CAACTCTGAA GACCCTGCAC
GCCTATGAGC ACTGA
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| Protein sequence | MAGRQRIDRV RRQYNQWVAN QTLEDYALRF TAKSARRWSA ARVANTALGA ISFLALEAIG
GTITLNYGVT NATAAILIAS VIIFCCGLPI AYHAAKCGID IDLLTRGAGF GYIGSTVTSL
IYASFTFIFF AIEAVILASA LEMCFGIPRP VGYLISAVVI IPLVTYGITL ISRFQLWTQP
LWVVLHILPF AAIAYASPHS FAEWQQFPGE HGDPAGHLDL ALFGTAAAVV FSLVAQIGEQ
VDFLRFLPRD RRTSSRSWWI ALLSAGPGWI VLGALKLLAG SFLAFFALSH GVSAERAAEP
AHMYLEAFRY VLAQPDLALA LTGTFVILSQ IKINVTNAYA GSIAWSNFFS RLTHSHPGRV
VWLVFNVVVA LLLMEIGVYK ALEQTLALYS NIAISWVGAL VADLVINRPL GLRPPQMEFK
RAHLYDINPV GVGAMTMATI VSISAFYGLF GPTGKALSTF VALGVALVTA PAIAYLTDGK
YYLARKPKRS WQNIEQIQCC ICEHHFEPED TTSCPAYAGP ICSLCCSLDA RCHDLCKPHA
RAQAQVAAAL SGMLPQSVLA KINSQFGHYV GVFLTSAGLV ALTLGMIYLE TSAALPGFKG
IISDVLWKVF FALSIIIGVV TWLFVLAQQS RRAAEAETRR QTQLLIQEIE AHKRTDAELQ
RAKEVAESAN LAKSRYVVGL SHELRSPLNA ISGYAQLLEQ DTSLAPKPRD QVRVVRRSAD
HLSGLIDGIL DISKIEAGRL YLSRDEVRLS EFLDQLVGMF RLQAAAKGID FVFKRPAVLP
LVVYADEKRL RQILINLLSN AIKFTQEGSV QFVVHYRSPV AEFEVIDTGP GIQPDDLERI
FAPFERGALG AAQPQTGTGL GLTISRLLAG VMGGDIKVES KVGLGSTFKV KILLSEVTNP
TRHAPVKAPV AGYLGPRKTI LITDDDPVHR DLLREVLTPL GFILLSAPDG PSCLALAQHC
QPDLFILDIS MPGMDGWTVA ETLRSSGHHQ ARILMTSASA LEAHGRPLAQ PFHDSYLMKP
IDIPRLLEAI RQLLKLDWSY QTDIPVAQPR WRPETGSRPP PRYVEELMGL GQIGYIRAIQ
LKLDEIGSAH PEHADFVAQM RTLIDRFDLD QYMATLKTLH AYEH
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