| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0602 |
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| Symbol | |
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| ID | 5149155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 605458 |
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| End bp | 607911 |
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| Gene Length | 2454 bp |
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| Protein Length | 817 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640555609 |
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| Product | hypothetical protein |
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| Protein accession | YP_001236781 |
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| Protein GI | 148252196 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.141077 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCACGCA GGCGGCGCAA ATCGACTCAT CAGCCAGTGG CGAATTTCCC TGCGAGATCG
CCAGAGGCAT CGTTGCGGGA ACCAGAGCCA CGACGATGGA ACTCGGGATT CTCTGGACTT
TTCTGGGCGG CCAGCTTGAT GGCAACGACT GCCATTCTGG CTTGGATTGC CTTTCTCTCG
CTCGAGAACA AGGCTTCGCC GGCCCCTGAG ATTGCTACCT ATGTCGGCAG CAACGCCTGC
GCTGGCTGTC ACCAGACGGA GGCACGGCTG TGGATGGCGT CTCAGCACAA GGGGGCAATG
CAGCACGCCA CCGACGGGAC GGTGCTCGGC AATTTCAACG ACGTGCGTTT TGACTATTTC
GGTGTGCAGT CCCGCTTCTT CCGTAAGAAT GGACAGTTTT TCGTGGAGAC CGATGGTCCC
GACGGAGCGC TGGCCGTCTA CGAAGTGAAA TATACCTTCG GCGTCGATCC GCTGCAGCAG
TATCTCGTTC CGTTCCCGGA CGGCCGCCTC CAGGTCCTGC CGATTGCATG GGACAGCCGA
CCTAGTGATA GAGGTGGCCA GCGATGGTTT CATCTCTCGG CAAATGAAGC GATCAGGCAC
GATGATGTTC TGCACTGGAC CAGATTGAAC CAGACCTGGA ACTTCATGTG CGCGGAATGC
CATTCCACTG GTGTGCGCAA GAACTACGAT GCGGAGAAGG ATCGGTTCGC GACGACGTGG
ACGGAGATCA GTGTGGGCTG TGAGGCATGT CATGGACAGG GCTCGCGCCA CGTCAGTTGG
GCGCACGAGC AGCAGAGCTG GTTGCCGTTT GGCAGGCGCC AGGACTCGAG CAAGGGATTG
CTGGTGCATC TTGATGAGCG CAACGGCATC ACTTGGTCAA TCGAGCCTCA GACAGGCAAC
GTGCAGCGCT CTTCCGAGCC CGCAGCCCTC CGCAAAGAGG TCGAGACTTG CGGCCTATGT
CACGCGCGTC GGGCGGCCTT TCATGAAGGC TGGATTCCCG GACATTCATT ATCGGAGACC
CATGCGGTCG AAGCGCTCTC GCGCAACACG TTCGATGTCG ACGGACAGAT CCGCGATGTC
GAGGAGCCGT ATAACTACAC ACCCTTCAGG CAAAGCAAGA TGTATGCGGC CGGCGTCAGC
TGCAGCGATT GCCATGAGCC GCACAGCGGA GGGCTTCGCC TCTCAGGCGA AGGTACATGC
CTGCAATGTC ACGCATCGAA CAAATACGCT GATGTGAAGC ATCGCCAGCA TGCGGGCGTC
GACCCCGCGC CGACCTGCAT CTCGTGCCAC ATGCCGACCC GGACCTACAT GTCGATCGAT
GCCAGACACG ATCACGCGTT CAGGGTTCCT CGACCCGATC AATCTGTGGC CTTGGGAACG
GCGAACGCCT GCAACGACTG CCATCGCGAT CAGTCGGCAC AATGGGCCGC AGCGGCGATT
GAGCGATGGT ACGGAGCTGA TCGCAAGGGC TTTCAAAGTT ACGGACCGAT ATTTCATGCC
GCCCGGATCA ACCGCACAGA CGCGGCGGCG CTTCTTTCGG AGCTGGCCTC GGATCGCCGC
GCGCCGGCCG TAGCGCGTGC CAGTGCGCTT GGCGAATTGG CATCTCGCAT GACGCGAGCG
GACATTTCAA CGGCCCGCGC CGCGCTTGGT GATCCCGATC CTATGGTGCG GCTCGGCGCG
CTGGACATGC TGGAAAACGT GCCCGCCGCT GAGATCTGGT CGTTCGTGTC TCCGCTTTTG
TCCGATCCCA GCCGCGGCGT TCGCATCAGA GCCGTTGCTC TGCTGGCCAA TATGCCAGTC
CGAAGTCAGC AGCCGGCGGA TCGTGCACGC TTCGATCTGG CGGCGGCTGA GTTCATCGCA
GCCCAGCGCT CCAACGCGGA GCGGCCGGAG GCTCGGACCG CTCTTGGGAA TTTTTTGTTG
CAGCGCGACC GACCGCAAGA GGCCGAGGCC GAATACCGGG CCGCACTGAG GCTAAGCCCG
CATTACGCGA CGGCCGCAAT CAACCTTGCC GACCTCTATC GGCAGCGCGG CCAGGACGGC
GAAGGTGAAG CGGTCCTGCG CACAGCGCTC GTGGCGTCGC CGCGCGACGC CGCGCTTTTT
TACTCCCTTG GCCTGACATT GACACGCCTC AGACGGCCGG ACGATGCACT CAACGCGTTG
GCTCGCGCAG CGGAACTGGA GCCGGAGCGT CAACGTTATG TTTACGTCTA CGGCATCGCT
CTGCATTCCA GCGGTCGCCG TGAGGCGGCG GTGAGTGTTC TGAAGGACGC CTTGCGCGCC
CATCCAAACG ATAGTCAGAT TTTGCAGGCG CTCATCTCCT TCAGTCGGAT GTCTGGGGAC
GCGACGTCGG CGCTCCGCTA TGCCGAGCAG CTTGCTGCGA TTGCGCCGAG CGATAAGGAG
CTGGCAGCGC TTATTCAGGA ACTCCGTCGC ATCGCGTCTC CGCCCGCAAG ATAG
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| Protein sequence | MARRRRKSTH QPVANFPARS PEASLREPEP RRWNSGFSGL FWAASLMATT AILAWIAFLS
LENKASPAPE IATYVGSNAC AGCHQTEARL WMASQHKGAM QHATDGTVLG NFNDVRFDYF
GVQSRFFRKN GQFFVETDGP DGALAVYEVK YTFGVDPLQQ YLVPFPDGRL QVLPIAWDSR
PSDRGGQRWF HLSANEAIRH DDVLHWTRLN QTWNFMCAEC HSTGVRKNYD AEKDRFATTW
TEISVGCEAC HGQGSRHVSW AHEQQSWLPF GRRQDSSKGL LVHLDERNGI TWSIEPQTGN
VQRSSEPAAL RKEVETCGLC HARRAAFHEG WIPGHSLSET HAVEALSRNT FDVDGQIRDV
EEPYNYTPFR QSKMYAAGVS CSDCHEPHSG GLRLSGEGTC LQCHASNKYA DVKHRQHAGV
DPAPTCISCH MPTRTYMSID ARHDHAFRVP RPDQSVALGT ANACNDCHRD QSAQWAAAAI
ERWYGADRKG FQSYGPIFHA ARINRTDAAA LLSELASDRR APAVARASAL GELASRMTRA
DISTARAALG DPDPMVRLGA LDMLENVPAA EIWSFVSPLL SDPSRGVRIR AVALLANMPV
RSQQPADRAR FDLAAAEFIA AQRSNAERPE ARTALGNFLL QRDRPQEAEA EYRAALRLSP
HYATAAINLA DLYRQRGQDG EGEAVLRTAL VASPRDAALF YSLGLTLTRL RRPDDALNAL
ARAAELEPER QRYVYVYGIA LHSSGRREAA VSVLKDALRA HPNDSQILQA LISFSRMSGD
ATSALRYAEQ LAAIAPSDKE LAALIQELRR IASPPAR
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