Gene BBta_0587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0587 
Symbol 
ID5155692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp592423 
End bp593280 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content57% 
IMG OID640555597 
Producthypothetical protein 
Protein accessionYP_001236769 
Protein GI148252184 
COG category[V] Defense mechanisms 
COG ID[COG3183] Predicted restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0296117 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTTC TGGATTACCT GAAGCCTAAA GATAAGCACC TGGTGATGGA CCTACTTGCC 
GAAGCAGGCG TAGATGTTGC CGCGTGGAAA AACTACAAGG GCCCGCCAGC GGCCAATCCG
AAGTATTGTT ACAACTGGTC CTTCGAGCAG CCCGATGAAC TGGTGGCGGT TTGCATCTGG
CACAGAGGTC TAAAGCTGGA AGGCTCCTCC GTCGTCCACA GGAGCAAACC CAGGAATTAT
GGCGCAGTCG GCACATCGCC AAGCGAGGTC GTTTGGAATC GGCGCGCCGA GGCATTCGAC
CAATCTCTGG AATTGGCATA TCGGCAGCGA CTTCCGGTTA GGGTGATTGT CGTCGACGGC
GAACAACGAG ACCCCAAAGC AACTAAGCCG TCGGCCTCGA AAGTACATGC ACGGCTTCTC
GATCCGGAGC CTTGGGCGGT CACCGAATAC AACTATAGAA CTGGCGAGAG ACTGCTTGTT
CGCGGCGCGA AACCCGGTGG GTCGCCGGTG GAGTCGGCAG ATCGGGAGAT GGCATGGTTT
GAAGGGTCTA GAAAACAAAA GTTCGTGTAC CATCGGCAAA GGGAGGGCCG TGCTCGTCGC
GAGAAAATTA GAGATACTTT AGCGAAGAGT GGCGGACGCC TCGTCTGCGA GGTCGAAAAC
TGCGGTTTCG ACTTCAAAGA ACGCTACGGC CCGCTCGGTG AAGGCTATGC CCAAGTCCAC
CATCTCGCCC CCTTGAGCAA TTCGCCTATC GGCGGCCGGA CGGTTAAGCT GAGGGACTTG
GCCATTGTCT GCGCAAATTG CCACGCGATG ATCCACATAG GCGGGGAGTG CCGCCCCCTC
AAAGGTTTGA TCGCATAG
 
Protein sequence
MSLLDYLKPK DKHLVMDLLA EAGVDVAAWK NYKGPPAANP KYCYNWSFEQ PDELVAVCIW 
HRGLKLEGSS VVHRSKPRNY GAVGTSPSEV VWNRRAEAFD QSLELAYRQR LPVRVIVVDG
EQRDPKATKP SASKVHARLL DPEPWAVTEY NYRTGERLLV RGAKPGGSPV ESADREMAWF
EGSRKQKFVY HRQREGRARR EKIRDTLAKS GGRLVCEVEN CGFDFKERYG PLGEGYAQVH
HLAPLSNSPI GGRTVKLRDL AIVCANCHAM IHIGGECRPL KGLIA