Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0587 |
Symbol | |
ID | 5155692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 592423 |
End bp | 593280 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640555597 |
Product | hypothetical protein |
Protein accession | YP_001236769 |
Protein GI | 148252184 |
COG category | [V] Defense mechanisms |
COG ID | [COG3183] Predicted restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0296117 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCTTC TGGATTACCT GAAGCCTAAA GATAAGCACC TGGTGATGGA CCTACTTGCC GAAGCAGGCG TAGATGTTGC CGCGTGGAAA AACTACAAGG GCCCGCCAGC GGCCAATCCG AAGTATTGTT ACAACTGGTC CTTCGAGCAG CCCGATGAAC TGGTGGCGGT TTGCATCTGG CACAGAGGTC TAAAGCTGGA AGGCTCCTCC GTCGTCCACA GGAGCAAACC CAGGAATTAT GGCGCAGTCG GCACATCGCC AAGCGAGGTC GTTTGGAATC GGCGCGCCGA GGCATTCGAC CAATCTCTGG AATTGGCATA TCGGCAGCGA CTTCCGGTTA GGGTGATTGT CGTCGACGGC GAACAACGAG ACCCCAAAGC AACTAAGCCG TCGGCCTCGA AAGTACATGC ACGGCTTCTC GATCCGGAGC CTTGGGCGGT CACCGAATAC AACTATAGAA CTGGCGAGAG ACTGCTTGTT CGCGGCGCGA AACCCGGTGG GTCGCCGGTG GAGTCGGCAG ATCGGGAGAT GGCATGGTTT GAAGGGTCTA GAAAACAAAA GTTCGTGTAC CATCGGCAAA GGGAGGGCCG TGCTCGTCGC GAGAAAATTA GAGATACTTT AGCGAAGAGT GGCGGACGCC TCGTCTGCGA GGTCGAAAAC TGCGGTTTCG ACTTCAAAGA ACGCTACGGC CCGCTCGGTG AAGGCTATGC CCAAGTCCAC CATCTCGCCC CCTTGAGCAA TTCGCCTATC GGCGGCCGGA CGGTTAAGCT GAGGGACTTG GCCATTGTCT GCGCAAATTG CCACGCGATG ATCCACATAG GCGGGGAGTG CCGCCCCCTC AAAGGTTTGA TCGCATAG
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Protein sequence | MSLLDYLKPK DKHLVMDLLA EAGVDVAAWK NYKGPPAANP KYCYNWSFEQ PDELVAVCIW HRGLKLEGSS VVHRSKPRNY GAVGTSPSEV VWNRRAEAFD QSLELAYRQR LPVRVIVVDG EQRDPKATKP SASKVHARLL DPEPWAVTEY NYRTGERLLV RGAKPGGSPV ESADREMAWF EGSRKQKFVY HRQREGRARR EKIRDTLAKS GGRLVCEVEN CGFDFKERYG PLGEGYAQVH HLAPLSNSPI GGRTVKLRDL AIVCANCHAM IHIGGECRPL KGLIA
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