Gene BBta_0571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0571 
Symbol 
ID5149416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp575370 
End bp576482 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content69% 
IMG OID640555582 
Productputative Alpha-methylacyl-CoA racemase (2-methylacyl-CoA racemase) (2-arylpropionyl-CoA epimerase) 
Protein accessionYP_001236755 
Protein GI148252170 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.552249 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCGACA AGACCGCACC ACACACCGGG ACCCGCGCCA CTGGCCCGCT CGCAGGCTTT 
CGCATCGTCG AATTCGCGGG CATCGGTCCG GGACCGTTCG CCTGCATGCT GCTGGCCGAC
ATGGGCGCGG AGGTGGTGAC GCTCGATCGC GTCGGCGCGC GCAAGACCAT GAAATCGGTC
GCCGGCCGCG GCCGCAAGGT CATCGAGCTC GACCTCAAGG ACAAGGCCGT CATCGCTGAC
GTGTTGGACC TGCTCGCCGG TGCCGATGCC CTCATCGAAG GTTTCCGGCC CGGCGTGATG
GAGCGGCTCG GCCTCGGCCC CGAAATCGTG CTCGCGCGCA ATCCGAAACT GGTCTATGGC
CGCATGACCG GCTGGGGCCA GGCGGGACCG CTGGCGCAGG CGGCGGGGCA CGACATCAAC
TACATCTCGA TCACCGGCGC GCTGGCGGCG ATCGGCCCGA AGGAGCGGCC GGTGCCGCCG
CTCAATCTGG TCGGCGATTT CGGCGGCGGC GCGCTCTATC TCGTGGTCGG CGTGCTCGCG
GCACTGCTGG AGGCCTCGAA GTCCGGCAAG GGCCAGGTGG TGGACACCGC GATGTGCGAC
GGGGCCGCGT CGCTGCTCGC GATGTTCTTC GACCTCACCG CGATGGGCCG CTGGACCGAG
GGACGCGAGC GCAACTTCCT CGACGGCGGC GCGCATTTCT ACGGCGTCTA CGAATGCGCC
TGCGGCAATT TCATCTCGAT CGGCTCGATC GAGCCGCAGT TCTACGCGCT GCTGCGCCAG
CACGCCGGCC TCTCCGATCC CGCCTTCGAG GCGCAGATGG ATCCGCGCGC CTGGCCGGCA
CTGAAGGAGA AGCTGGTCGC GGTGTTCAAG AGCAAGACGC GCGAGGAGTG GTGCGCCATC
ATGGAAGGCA CCGACATCTG CTTCGCCCCG GTGCTGACGA TGTCGGAAGC CCCGAAGCAC
GCCCACATGG CCGCCCGCGG CGTGTTCGTC GAGCGGCACG GCGTGACACA GCCGGCGCCA
GCGCCGCGCT TCTCGCGGAC GCCGTCGAAT ATTCGCGAGC CTGAGGTGAC GGAGATCGGC
GCCGTGGTGA ACGCGTGGAA GGCGGGGCGA TAA
 
Protein sequence
MLDKTAPHTG TRATGPLAGF RIVEFAGIGP GPFACMLLAD MGAEVVTLDR VGARKTMKSV 
AGRGRKVIEL DLKDKAVIAD VLDLLAGADA LIEGFRPGVM ERLGLGPEIV LARNPKLVYG
RMTGWGQAGP LAQAAGHDIN YISITGALAA IGPKERPVPP LNLVGDFGGG ALYLVVGVLA
ALLEASKSGK GQVVDTAMCD GAASLLAMFF DLTAMGRWTE GRERNFLDGG AHFYGVYECA
CGNFISIGSI EPQFYALLRQ HAGLSDPAFE AQMDPRAWPA LKEKLVAVFK SKTREEWCAI
MEGTDICFAP VLTMSEAPKH AHMAARGVFV ERHGVTQPAP APRFSRTPSN IREPEVTEIG
AVVNAWKAGR