| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0566 |
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| Symbol | hmgA |
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| ID | 5153991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 570086 |
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| End bp | 571435 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640555577 |
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| Product | homogentisate 1,2-dioxygenase |
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| Protein accession | YP_001236750 |
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| Protein GI | 148252165 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR01015] homogentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.11982 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.485064 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAACA TCAATACATC GCCTGACCAG CTCAGCCGCG CCTCGGCGCA GGTTACGCCG
GGCTACATGT CCGGCTTTGG CAATTCGTTC GAGACCGAGG CGCTGCCCGG CGCGCTGCCG
ATCGGCCGTA ACTCGCCGCA GCGCTGCGCC TATGGCCTCT ATGCCGAGCA GCTTTCCGGC
TCGCCCTTCA CCGCGCCGCG CGGCTCCAAC GAGCGCTCCT GGCTGTATCG CATCCGTCCT
TCGGTGAAGC ACTCCGGCCG CTTCGCGAAG GTCGACGCCG GGCTGTGGCG CACGGCGCCG
TGCCACGAGC AGGAGATCAC GGTGCAGCAG CTGCGCTGGG ATCCGACACC GGTGCCGTCC
GGTGAGGTCA CCTTCCTGCA GGGCGTGCAG ACCATGACGA CGGCGGGCGA CGCCGCGACG
CAGTCCGGCA TGGCCGCGCA TGTCTATGTC ATCACCAAGT CGATGGTCGA TCAGCATTTC
TACAATGCTG ACGGCGAACT GATGTTCGTG CTGCAGCAGG GACGCCTGTT GTTCGTCACC
GAGTTCGGCC GCATCGATGC CGCGCCCGGC GAGATCGTCA TGATCCCGCG CGGCGTCAAG
TTCCGTGTCG AGCTTCCGGC AGGGCCGGCG CGGGGCTATC TGTGTGAGAA TTATGGCGGG
GCTTTCACCC TGCCGGAGCG TGGCCCGATC GGCGCCAACT GCCTCGCCAA CGCCCGCGAC
TTCCTGACGC CAGTCGCTTC GTATGAGGAC AAGGACACGC CGACCGAGCT CTACGTGAAG
TGGGGCGGTG CGCTGTTCAA GACCGAGCTG AAGCACTCGC CGATCGACGT CGTCGCCTGG
CATGGCAACT ACGCGCCATA CAAATATGAT CTGCGAACCT TCTCGCCGGT CGGCGCCATC
GGTTTCGATC ATCCCGATCC ATCGATCTTC ACGGTGCTGA CCTCGCCGTC GGAAACGGCC
GGCACGGCCA ATATCGACTT CGTGATCTTC CCCGAGCGCT GGATGGTGGC CGACAACACC
TTCCGTCCGC CATGGTATCA CATGAACATC ATGTCCGAAT TCATGGGCCT GATCTACGGC
GTCTACGACG CCAAGCCGCA GGGCTTCGTT CCCGGCGGCA TGTCGCTGCA CAATTGCATG
CTGCCGCACG GACCGGATCG CGAGGCGTTC GATCACGCCA GCAATGGCGA GTTGAAGCCG
GTGAAGCTCA CGGGCACTAT GGCCTTCATG TTCGAGACCC GCTTCCCGCA GCGGATCACC
AAGCATGCGG CGGAGTCCAG CACACTGCAG CCGGATTACG CGGACTGCTG GAACGGACTG
GAAAAGCGTT TTGATCCGAA CCGGCCTTAG
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| Protein sequence | MMNINTSPDQ LSRASAQVTP GYMSGFGNSF ETEALPGALP IGRNSPQRCA YGLYAEQLSG
SPFTAPRGSN ERSWLYRIRP SVKHSGRFAK VDAGLWRTAP CHEQEITVQQ LRWDPTPVPS
GEVTFLQGVQ TMTTAGDAAT QSGMAAHVYV ITKSMVDQHF YNADGELMFV LQQGRLLFVT
EFGRIDAAPG EIVMIPRGVK FRVELPAGPA RGYLCENYGG AFTLPERGPI GANCLANARD
FLTPVASYED KDTPTELYVK WGGALFKTEL KHSPIDVVAW HGNYAPYKYD LRTFSPVGAI
GFDHPDPSIF TVLTSPSETA GTANIDFVIF PERWMVADNT FRPPWYHMNI MSEFMGLIYG
VYDAKPQGFV PGGMSLHNCM LPHGPDREAF DHASNGELKP VKLTGTMAFM FETRFPQRIT
KHAAESSTLQ PDYADCWNGL EKRFDPNRP
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