Gene BBta_0563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0563 
Symbol 
ID5153988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp567236 
End bp568870 
Gene Length1635 bp 
Protein Length544 aa 
Translation table11 
GC content65% 
IMG OID640555574 
ProductFAD-dependent oxidoreductase 
Protein accessionYP_001236747 
Protein GI148252162 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.636455 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCAGG TCAATCCGGG GCAGGGCGCA AGCCACGCGA AGGTTCAGTT CGGCTATCAC 
CGGCACGGCG ATCAGGATCG GGCCGCGCCG GCCGAACATC CGGTCGTCGT CGTGGGCGCC
GGCCCGGTGG GCCTGTCCTT CGCGATTGAT CTCGCGCAGC GTGGTCACGC GGTCGTTGTG
CTGGACGATG CCGATCGGAT CGGCGAAGGC TCGCGCGCGA TATGTTTCTC CAAGCGTTCG
CTGGATTATT GGGACCGGCT CGGTGTCGGC GACCGCATGG TCGACAAGGG CGTGGTATGG
AACGTCGGTC GCATCTTCCA CGGGCCGTCC GAACTCTATC AGTTCAATTT GCTGCCGGAG
CCGGGACACA AGCGGCCGGC CTTCATCAAC CTGCAGCAAT TCTACGCCGA GGCGTATCTC
GTTGATCGCG TCAACGAACT GCCGGAGATC TCGCTGCGTT GGCGCAACAA GGTGACCGCG
CTGGAACAGC GCAATGATCG CGCCGTCCTG ACGATCGAGA CTCCCGACGG CCCCTATCGG
CTGTCGGCGC GATATGTCGT GGCCTGCGAC GGCGCCCGCT CGTCGCTGCG CCAGATGGTC
GGCGCAGGCT TTTCCGGCAA AGTGTTCGAG GATCAGTTCC TGATCGCCGA CGTCAAGATG
ACCGCGGAGT TTCCGACCGA GCGCTGGTTC TGGTTCGATC CGCCGTTTCA TGCCGGTCGC
TCGGCGCTGC TGCATCGCCA GCCCGACGAC GTCTGGCGCA TCGATCTGCA GCTGACCCCG
GACTGCGATC CTCAGGTCGA GAAGAAGCCC GAGAACGTGC GGCCGCGCAT CGCACGCATG
CTCGGCCATG ACGAGTTCGA ATTCGAATGG ATCTCGATCT ACAAATTCCA GTGCCGGCGC
ATGCAGCGGT TCATCCATGG CAGCGTGATC TTCGCTGGCG ATTCCGCGCA TCAGGTCTCG
CCGTTCGGCG CCCGCGGCGC CAATTCGGGT CTCGAGGATG CGGAGAACCT GTCCTGGAAG
CTCGATCGCG TGCTGCGCGG AACCTCGCCA TCGCAGCTAC TTGAGACCTA CCACATCGAG
CGCAGCGCCG CGGCCGATGA GAACATCCGC GAATCGACCC GTGCCACCGA TTTCATGGCG
CCGGTCAGCG CGCAGGAGGC GCGGCTGCGC AAGGCGGTGC TGTCCCTGGC TAAGGAGACC
GAGTTCGGCA AGCGCATGGT CAATGGCGGC CGGCTCTCGG TGCCCTCGGT CTATGAGACG
CCGCTGTCGA CGGCCGATGC CGAGGAATGG CAGGGCGGGC CTTGTCCGGG AACTTCGATG
CTGGATGCGC CGCTCAAAGC GACCGATGGA CGGCACCTTC ATCTCACCGA TGCGTTCAAT
GTCTTGGGCC GGCGCTTCAC GTTGCTGGCT TTCGCCAATG GCGGGGACGT CGATGCGCCC
GACGAGGTGG GCGTCGTTCG GATTGATGGA GATGACGGAT TCGCGGACGC CGAAGGCTTC
GCTGGGAAAC GCTACGATGC CAAGCCCGGC ACCGCCTATC TGCTCCGTCC CGACGGCTAC
GTCGCGGCCC GCTTCCGGCA TCCGACGCGG GCAGCGATCG CGGCCGCCGT GGCGCGCGCG
TCCGGCCTGA ACTGA
 
Protein sequence
MVQVNPGQGA SHAKVQFGYH RHGDQDRAAP AEHPVVVVGA GPVGLSFAID LAQRGHAVVV 
LDDADRIGEG SRAICFSKRS LDYWDRLGVG DRMVDKGVVW NVGRIFHGPS ELYQFNLLPE
PGHKRPAFIN LQQFYAEAYL VDRVNELPEI SLRWRNKVTA LEQRNDRAVL TIETPDGPYR
LSARYVVACD GARSSLRQMV GAGFSGKVFE DQFLIADVKM TAEFPTERWF WFDPPFHAGR
SALLHRQPDD VWRIDLQLTP DCDPQVEKKP ENVRPRIARM LGHDEFEFEW ISIYKFQCRR
MQRFIHGSVI FAGDSAHQVS PFGARGANSG LEDAENLSWK LDRVLRGTSP SQLLETYHIE
RSAAADENIR ESTRATDFMA PVSAQEARLR KAVLSLAKET EFGKRMVNGG RLSVPSVYET
PLSTADAEEW QGGPCPGTSM LDAPLKATDG RHLHLTDAFN VLGRRFTLLA FANGGDVDAP
DEVGVVRIDG DDGFADAEGF AGKRYDAKPG TAYLLRPDGY VAARFRHPTR AAIAAAVARA
SGLN