| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0562 |
|---|
| Symbol | |
|---|
| ID | 5151050 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 566514 |
|---|
| End bp | 567071 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640555573 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_001236746 |
|---|
| Protein GI | 148252161 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.490708 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCAAATC CCGCCGACAC GGCGTCCAGG CGCCAGCCCA AGCCGGTTGA AGCCAGCCGA
AATGCCGCAG CGCCACATGC GGAGGAGCGG CTCGATCTGT TCAAGTTCGC GCCATTTCGG
CTGAACCGCC TGGCGGCGGA GGTCAGCGCC GCGCTCGCCA GCGAATATCG CGAGCGCTAC
GGCCTCGACA TTCCCGAATG GCGCGTGCTG GCGACGCTCG GGTTTCGCCG CGAAGCCTGC
AGCGCGCAAT ATGTCGCAGA GTGCACGCGC ACGCATAAGT CAACGATCAG CCGCGCCGTG
ACCGCGCTGT TGGAGCGGCG CCTGATCGAA CGCGTCGAGA ATGCCGAGGA TCGGCGCGAA
TTCCGCCTGC GCCTCACCCG CAAGGGCAAG ACGCTGTACG AGGAACTGAT TCCCCGGCTG
CAGCAGCGCG AGCGCGAGAT CATGGCGTGC CTGTCAGCCG ACGAGCGCAG GGCATTCGAC
CGCCTCATCG GCAAGATCGA GGCGAGCCTC GACCTGATCC AGACCAGCGA GGAGGCGGAC
GCGAAACAGG CCTATTAG
|
|---|
| Protein sequence | MANPADTASR RQPKPVEASR NAAAPHAEER LDLFKFAPFR LNRLAAEVSA ALASEYRERY
GLDIPEWRVL ATLGFRREAC SAQYVAECTR THKSTISRAV TALLERRLIE RVENAEDRRE
FRLRLTRKGK TLYEELIPRL QQREREIMAC LSADERRAFD RLIGKIEASL DLIQTSEEAD
AKQAY
|
|---|
| |