Gene BBta_0555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0555 
Symbol 
ID5156005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp553848 
End bp554486 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content66% 
IMG OID640555566 
Producthypothetical protein 
Protein accessionYP_001236739 
Protein GI148252154 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.279361 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CTGACGGGCC TGTTCGTGGC CGTAACGCTG AGCGCCGCGG CCGCGCTGAG CGTCACCGCG 
GCCAAGGCTG CCGAGGATGT CACCGAAGAC CAGATCGTCC GGGCGCTGGC CGGACCCAAG
AAGCCGCTGA CCCGCGGACT GTCGCTGTCG CCGCCGTCCG AAGCGGCGCC TGCCGCAGCG
CCGGAACAGG ACAAGTTCCT GCAGAGCATC CGCGGCCGTT CGACGCGCTC GCTGTCGACG
GCAGAACGCG AGGAGATCGC GGCGGTCGCC AAGTCCAAGC CGAACATCGA TCTCGAGATC
ACCTTCGACT ACAATTCCGC CAATATCAGC CAGAAGTCGC TCGCATCGGT GCAGGCGCTC
GGCCGCGCGC TGACCAGTCC CGACCTCAAG GGCTCGACCT TCGTCGTGGC CGGGCATACT
GATGCCGCGG GTGGCGATGC CTATAATCAG GATCTGTCGG AGCGCCGCGC CGATTCGATC
AAGCGCTATC TGGTCGAGAA GTTCGGCATT GCCGGCGCCG ATCTGGTGAC GGTGGGCTAC
GGCAAGAGCA AGCTCAAGGA TCCGAGCCAG CCGCTCGCCG AGGTGAACCG CCGCGTCCAG
GTGGTCAATA TGCAGAGCAA GACGGCGGCC GCCAAGTAG
 
Protein sequence
MTGLFVAVTL SAAAALSVTA AKAAEDVTED QIVRALAGPK KPLTRGLSLS PPSEAAPAAA 
PEQDKFLQSI RGRSTRSLST AEREEIAAVA KSKPNIDLEI TFDYNSANIS QKSLASVQAL
GRALTSPDLK GSTFVVAGHT DAAGGDAYNQ DLSERRADSI KRYLVEKFGI AGADLVTVGY
GKSKLKDPSQ PLAEVNRRVQ VVNMQSKTAA AK