| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0540 |
|---|
| Symbol | |
|---|
| ID | 5156289 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 536258 |
|---|
| End bp | 536977 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640555554 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001236727 |
|---|
| Protein GI | 148252142 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0684] Demethylmenaquinone methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAAC TCAGCACCGC CACCCGCAAC AAGCTCAAGA CCGTGTCGAC GGCCACCGTC
GCCACCGCGC TGTTCAAGCG CGGCCTGCGC ATCCAGTGCA TCCAGAACGT TCATCCGCTC
AGCCCGCAGC AGCCGACGAT GGTCGGCGAG GCGTTCACGC TGCGCTACAT CCCGGCGCGC
GAGGACCTCA ATACGATCGA GGTGTTCAAG GATCGCGGCC ATCCGCAGCG CAAGGCGGTG
GAGGAATGTC CGCCCGGCGC TGTCCTGGTG ATGGACAGCC GCAAGGACGC GCGGGCGGCG
TCGGCTGGGG CGATCCTGGT CAGCCGCCTG CAGCAGCGCG GCGTCGCCGG TGTCGTCACC
GACGGTGGCT TCCGGGATTC CGCCGAGATC GCCAAGCTCG GCATTCCCGC CTTTCACCAG
CGCCCGAGCG CGCCGACCAA TCTCACTTTG CATCATGCGA TCGAGATCAA CGGCCCGATC
GCCTGCGGCG ATGCCCCGGT GTTTCCCGGC GATGTGATTC TCGGCGACTC CGATGGCGTC
ATCGTCATCC CAGCTGGCAT CGCCGATGAG ATCGCCGACG AGACCTTCGA GATGACGGCG
TTCGAGGACT TCGTCGCTGA CCAGGTCGCG CAAGGCCGCT CCATCCTCGG CCTCTATCCG
CCGACCGATC CGCAGACCCC GCAGGACTTC GCGGCCTGGC GGGCCAGGAA CGGGCGCTGA
|
|---|
| Protein sequence | MTKLSTATRN KLKTVSTATV ATALFKRGLR IQCIQNVHPL SPQQPTMVGE AFTLRYIPAR
EDLNTIEVFK DRGHPQRKAV EECPPGAVLV MDSRKDARAA SAGAILVSRL QQRGVAGVVT
DGGFRDSAEI AKLGIPAFHQ RPSAPTNLTL HHAIEINGPI ACGDAPVFPG DVILGDSDGV
IVIPAGIADE IADETFEMTA FEDFVADQVA QGRSILGLYP PTDPQTPQDF AAWRARNGR
|
|---|
| |