| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0539 |
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| Symbol | |
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| ID | 5156288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 534302 |
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| End bp | 536038 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640555553 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001236726 |
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| Protein GI | 148252141 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGC AAAAGCAACC CGATCAGCTG CGCAGTGCGC GCTGGTTCGC GCCAGACGAC
CTCCGCTCCT TTGGTCACCG CTCGCGCGTG ATGCAGATGG GCTATGCCCA GGAGGAGTGG
AAGGGCCGCC CGGTCATCGC CATCGTCAAC ACCTGGTCCG ATGCGCAGCC CTGCCACATG
CACTTCAAGC AGCGCGTCGA CGACGTCAAG CGCGGCGTGC TGATGGCGGG CGGCTTCCCG
ATCGAGTTGC CGGCGCTGTC GCTGTCGGAG TCGCTCCTGA AGCCGACCAC GATGCTCTAT
CGCAACATGC TGGCGATGGA TGTCGAGGAG CTCCTGCGCA GCCATCCCGT CGACGGTGTC
GTCCTGATGG GCGGCTGCGA CAAGACCACG CCGGCGCTCC TGCTCGGCGC CACCAGCATG
AACCTGCCGG CGATCTATCT CCCCGCAGGG CCGATGCTGC GCGGCAATTG GAAGGGCAAG
ACGCTCGGCT CCGGCTCCGA CGCCTGGAAA TACTGGGACG AGCGCCGCGC CGGAAAACTG
TCGGACGCCG ATTGGAGCGC GATGGAGGCC GGCATCGCCC GCAGCCATGG CACCTGCATG
ACCATGGGCA CGGCGTCGAC CATGACCGCG ATCGCCGAAG CGATCGGCAT GACCCTACCG
GGCGCGTCCT CGATTCCGGC TGCCGATGCC GAGCACATCC GCATGAGCTC GGAATGCGGC
CGCCGCATCG TCGAGATGGT GTGGGAGGAT CTGACGCCCG CGAAGATCCA GAGCCGTCAG
GCGTTCGAGA ATGCCATCGC AGTGGCCATG GCGATGGGCT GCTCGACCAA CGCGATCATC
CATGTGATTG CGCAGGCGCG CCGCGCCGGC GCCGATATCG GCCTCGACGA TTTCGAGGCC
GCCAGCCGCA AGGTGCCGGT GCTCGCCAAT GTCCGGCCGA GCGGCGACAC CTATCTGATG
GAGGATTTCT ACTATGCCGG CGGGCTGCCC GGGCTGATGA GCCGGATGAA AGAGCATCTC
CATCTCGGCT GCCTCACCGT CAATGGCCGC ACCCTCGGCG ACAATATCGC CGACGCCGGC
GTCTACAATG ACGATGTGAT CCGGCCGCAG TCCAACCCGA TCTATCGCGA AGGCGCGCTC
GCCGTCCTCA AGGGCAATCT CGCCCCGGAC GGCTGCGTCA TCAAGCCCTC CGCCTGCGAT
CCGCGGTTCC TCAAGCATAC CGGCCCGGCG CTGGTGTTCG ACGACTATCC GTCGATGAAG
AAGGCGATCG ACGATCCCGA TCTCGACGTG ACAGCCGATC ACGTGCTGAT CCTGCGCAAT
GCTGGCCCGC AAGGCGGACC GGGCATGCCG GAATGGGGCA TGCTCCCGAT TCCGACCAAG
CTCGTGAAAC AGGGCGTGCG CGACATGGTG CGGCTGTCGG ACGCGCGCAT GAGCGGCACC
TCCTATGGCG CCTGCATCCT GCACGTCGCG CCGGAAGCCT ATGTCGGCGG TCCGCTGGCG
CTGGTGCGCA ATGGCGACCT CATCACGCTC GACGTCGCCG CGCGCACGAT TGATCTCGAC
GTGCCAGAAG ACGAACTGGC GCGTCGCCGC GCCGAATGGC AGCCGCCCGC GCCGCGCTTC
GAGCGCGGCT ATGGGTGGAT GTTCGCCCGC CACATCAAGC AGGCCAATGA TGGCTGCGAT
TTCGATTTCC TCGAGACCAG TTTCGGCGCC CCCATCGGGG AGCCCGCGAT CTATTAG
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| Protein sequence | MTKQKQPDQL RSARWFAPDD LRSFGHRSRV MQMGYAQEEW KGRPVIAIVN TWSDAQPCHM
HFKQRVDDVK RGVLMAGGFP IELPALSLSE SLLKPTTMLY RNMLAMDVEE LLRSHPVDGV
VLMGGCDKTT PALLLGATSM NLPAIYLPAG PMLRGNWKGK TLGSGSDAWK YWDERRAGKL
SDADWSAMEA GIARSHGTCM TMGTASTMTA IAEAIGMTLP GASSIPAADA EHIRMSSECG
RRIVEMVWED LTPAKIQSRQ AFENAIAVAM AMGCSTNAII HVIAQARRAG ADIGLDDFEA
ASRKVPVLAN VRPSGDTYLM EDFYYAGGLP GLMSRMKEHL HLGCLTVNGR TLGDNIADAG
VYNDDVIRPQ SNPIYREGAL AVLKGNLAPD GCVIKPSACD PRFLKHTGPA LVFDDYPSMK
KAIDDPDLDV TADHVLILRN AGPQGGPGMP EWGMLPIPTK LVKQGVRDMV RLSDARMSGT
SYGACILHVA PEAYVGGPLA LVRNGDLITL DVAARTIDLD VPEDELARRR AEWQPPAPRF
ERGYGWMFAR HIKQANDGCD FDFLETSFGA PIGEPAIY
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