Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0536 |
Symbol | |
ID | 5155114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 531638 |
End bp | 532666 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640555550 |
Product | putative ABC transporter (substrate-binding protein) |
Protein accession | YP_001236723 |
Protein GI | 148252138 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00532956 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGATGA GTTTCGGGCG CTCGGCCACA CGAGCCGCAG GTCTGCTGGC CGCCTTGGCT GCGACGACGT GGAGTGTTGC GGCTGCGGCG CAGCAGAAGA CCGAAGTCTC GCTGTCACGC CAGCCCGGCA TCTTCTACAT GCCGAGCCAC ATCATCGAGA AGCAGAAGCT GATCGAGAAG CATGCCGCCG CGCTCGGTCT TGCCGGCGTG ACGACCAAAT GGCTGACCTT CTCCGGCGGT GGTGCGCAGA CCGATGCGCT GCTCTCCGGC AGCGTCGATA TCCTCAACAC CGGCACCGGC AATCTGCTGC TGCTGTGGGA CCGCACCCGT GGCGGCGTGA AGGGCATCGT CGCCACCTCG GCGCAGCCGA TGACGTTGAT CAGCCGTGAT CCCCATATCA AGTCGATCAA GGATTTCGGC CCGACCGACA AGATCGCGGT GCCGACTGTG AAGGTCTCGA CCCAGGCCAT CGTGCTGCAG ATCGCCGCCG CCGAGGCGTT CGGCGCCGAC CAGTGGAATA AGCTCGACGC CAATACGGTG CAGCTCGGTC ATCCCGACGC CTATACGGCG CTGTCCAATC CGCAGCACGA GGTGCACAAT CACTTTTCGA TCCCGCCCTA TACGTTCCTC GAAATGAAGA ACGTGCCGGG GGCGCATGTC GTGCTGAACT CGCCCGATGT GATGGGCGGG CCGCTCAGCC AGGCGCAGTT CTTCACCACC ACGAAGTTCG CCGACGCCAA TCCGAAGATC ATCCAGGCGG TGCGCGACGC CACCAAGGAG GCCCAGGATC TGATCCGCAG CGACACGAAA GCAGCGGTCG AGATCTACAA GGAGATCACC GGCGACAAGA CGTCGACGGA GGACCTGCTG GCCTGGCTCA AGGAACCCGG CATGATGGAG TGGAACCTCG AGCCGCAGGG TACGATGAAG TTCGCGACCC ATCTCGCCAA GATCGGCACC ATCAAGACTC AGCCCAAGGC CTGGACCGAC TATTATCTGC CGGTGGCACA CGACCTGAAG GGCAACTGA
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Protein sequence | MLMSFGRSAT RAAGLLAALA ATTWSVAAAA QQKTEVSLSR QPGIFYMPSH IIEKQKLIEK HAAALGLAGV TTKWLTFSGG GAQTDALLSG SVDILNTGTG NLLLLWDRTR GGVKGIVATS AQPMTLISRD PHIKSIKDFG PTDKIAVPTV KVSTQAIVLQ IAAAEAFGAD QWNKLDANTV QLGHPDAYTA LSNPQHEVHN HFSIPPYTFL EMKNVPGAHV VLNSPDVMGG PLSQAQFFTT TKFADANPKI IQAVRDATKE AQDLIRSDTK AAVEIYKEIT GDKTSTEDLL AWLKEPGMME WNLEPQGTMK FATHLAKIGT IKTQPKAWTD YYLPVAHDLK GN
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