Gene BBta_0536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0536 
Symbol 
ID5155114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp531638 
End bp532666 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content63% 
IMG OID640555550 
Productputative ABC transporter (substrate-binding protein) 
Protein accessionYP_001236723 
Protein GI148252138 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00532956 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGATGA GTTTCGGGCG CTCGGCCACA CGAGCCGCAG GTCTGCTGGC CGCCTTGGCT 
GCGACGACGT GGAGTGTTGC GGCTGCGGCG CAGCAGAAGA CCGAAGTCTC GCTGTCACGC
CAGCCCGGCA TCTTCTACAT GCCGAGCCAC ATCATCGAGA AGCAGAAGCT GATCGAGAAG
CATGCCGCCG CGCTCGGTCT TGCCGGCGTG ACGACCAAAT GGCTGACCTT CTCCGGCGGT
GGTGCGCAGA CCGATGCGCT GCTCTCCGGC AGCGTCGATA TCCTCAACAC CGGCACCGGC
AATCTGCTGC TGCTGTGGGA CCGCACCCGT GGCGGCGTGA AGGGCATCGT CGCCACCTCG
GCGCAGCCGA TGACGTTGAT CAGCCGTGAT CCCCATATCA AGTCGATCAA GGATTTCGGC
CCGACCGACA AGATCGCGGT GCCGACTGTG AAGGTCTCGA CCCAGGCCAT CGTGCTGCAG
ATCGCCGCCG CCGAGGCGTT CGGCGCCGAC CAGTGGAATA AGCTCGACGC CAATACGGTG
CAGCTCGGTC ATCCCGACGC CTATACGGCG CTGTCCAATC CGCAGCACGA GGTGCACAAT
CACTTTTCGA TCCCGCCCTA TACGTTCCTC GAAATGAAGA ACGTGCCGGG GGCGCATGTC
GTGCTGAACT CGCCCGATGT GATGGGCGGG CCGCTCAGCC AGGCGCAGTT CTTCACCACC
ACGAAGTTCG CCGACGCCAA TCCGAAGATC ATCCAGGCGG TGCGCGACGC CACCAAGGAG
GCCCAGGATC TGATCCGCAG CGACACGAAA GCAGCGGTCG AGATCTACAA GGAGATCACC
GGCGACAAGA CGTCGACGGA GGACCTGCTG GCCTGGCTCA AGGAACCCGG CATGATGGAG
TGGAACCTCG AGCCGCAGGG TACGATGAAG TTCGCGACCC ATCTCGCCAA GATCGGCACC
ATCAAGACTC AGCCCAAGGC CTGGACCGAC TATTATCTGC CGGTGGCACA CGACCTGAAG
GGCAACTGA
 
Protein sequence
MLMSFGRSAT RAAGLLAALA ATTWSVAAAA QQKTEVSLSR QPGIFYMPSH IIEKQKLIEK 
HAAALGLAGV TTKWLTFSGG GAQTDALLSG SVDILNTGTG NLLLLWDRTR GGVKGIVATS
AQPMTLISRD PHIKSIKDFG PTDKIAVPTV KVSTQAIVLQ IAAAEAFGAD QWNKLDANTV
QLGHPDAYTA LSNPQHEVHN HFSIPPYTFL EMKNVPGAHV VLNSPDVMGG PLSQAQFFTT
TKFADANPKI IQAVRDATKE AQDLIRSDTK AAVEIYKEIT GDKTSTEDLL AWLKEPGMME
WNLEPQGTMK FATHLAKIGT IKTQPKAWTD YYLPVAHDLK GN