| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0531 |
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| Symbol | |
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| ID | 5155892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 522024 |
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| End bp | 525605 |
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| Gene Length | 3582 bp |
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| Protein Length | 1193 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640555545 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001236718 |
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| Protein GI | 148252133 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCAGC AGCCTGGCCG GGCCGGGTCG CCTGACGGCC GCGAGGCGCT CGGCCTGGGC
CGGCGCCTGA CGCTCACGAC GCGGCTCGCC ATTGCGATGA TCCTGCTGGT CGCGATGGCC
GTGTTCGCTG TCGGCTGGCT TGGCTACCGC AGCCTCGAAA GCGCGCTGCT GCCGCGTGCC
CTGGACCGCA TCGAAGCGCA TTCGCGCCTG ATGGCCACCG AGCTCGAGAA CTATGTCGGC
GGCGCCCGCA ACGATCTCAA CGGCTATCGC GCCTCGCCCA ATCTCGCCAC GCTCATTCGC
ACGCTGAAAA CGGGAGGCCC CGATCCGCGC GAGGGTCTGT CGGCGCAGTC GTGGCGCGAG
CGGGTCGCCA TGCGCTATTT TGCCGAGCTG CAGGCCAAGA CGACCTACGC GATGGTCCGC
CTGGTCGGGA TCGAAAACAA TTATCGCGAG CTGATCCGGG TCGACCGGCT AGGACCCGGC
GGCACGGTTC GCATCGTTCC CGAGAATGAG CTGATCACAC GCGGCGATCG CAAATATATC
ACGGAGACGC TGCAGCTCGC GCCCGGCGGA ATCCGCGTGT CGCCGATCAT TCTCGACGGC
AACACGACGG ACCCGAAGAC CGGCGTCCCG ATGCTCTGCG TGGGCACGCC CGTGTTCTCG
CCGGACGGCA AGCCATTTGC CATTTTGATG CTCGATCTGG ACATGCGGCC GATCTTCGCA
CATCTGCGTT CGGCGGCGCG CCCGGGCGCT CAGCTCTACG TCGTGAACGC TCGCGGCGAC
TATCTCTTCC ATCCCGAGTC GGACCGCGAG TTCGCCTCGA AGCGCGGCGG ATCGACGCGG
TGGCAGGACG ATTTTCCGAG CCTGGCGAGC GCGACCGGCT CGACCCAGGG CTTCGCACGG
ATTCTTCACG ACGACGCGAA GCGTCCGGGC GGCGTGGCCT TCGCTCCGGC GATGCTCGCC
GGGCAGGAAT GGGTCGCAGT GATCGAGACG ATCCCGAACA CCGCCTTCAT GGCGCCGGCG
CTCGCCATTC GGAAGACGGC GATCGAGGTC GGATTGATCG CGATGCTGTG CGCGGCCGCC
CTCGCTTTCG TCGTGGCGCG GTCGCTGACA CGTCCCATCA ATCAACTGAC CCAAGCCGTC
GAAAGCGTGG GGCGCGGCGA GTCGGTGAAA ATTCCGCTGG AGGCCGTCGG CGAGACCGGG
GTCCTGGCGC GGGCGTTCGC GCGGGTCCTG GAGGAGGTCC GCGCCAAGAC CGCGGAGCTC
GAACGCGAGG TCCAGGAACA TTACCTGACG GAGGCGGCAC GCGATCATTT CGCGGCGCGC
GAGCGGCTGT ACAGCGCCGC GGTCGAATCC TCCAATGATG CCATCGTGAC CCTCGCGCTC
GACGGCACCA TCACGGCCTG GAATCCGGCC GCCGAGACCA TGCTCGGCTA CGCCGCCGAA
GAGGCCGTCG GCCGCCAGGC AGATTTCGTC GTGCCCGCCG ACCGAATGGC CGAAGCCCAG
GACATCCTGC TGCGCGTCGC ACGAGGCGAG CGGATCCAGC ATTTCGAGAC GGTGCGTATT
CGCAAGGATG GCGAGCACAT TCTTGTCTCG CTCAGCGTCT CCCCGATCAA GTCACCCACC
GGACAGATCA TCGGCGCATC CAAGATCGCG CGCGACATCA CCGAGAGTCG CAAGACCGAG
CAGGCCCTGC GTCAGCAGAC GGAGGAACGC CGGCGGATCT TCGAGACATC GCAGGATCTG
ATCCTGATCA CCGACCGCAG CGGCATCTTG GTGCAGGTCT CGCCGAGCGT CGAGGCCATT
CTCGGCTATA CGCCTGCCGA GATGATTGGC CGCAACGGCG CTGACTTCAT CCATCCGGAC
GATCTGCAGA AGGCCCGCGA CGAACTACGC GCGTCCCGCC ATGGGCTGAG CCCGCGCAAC
TCCGACGGTC GCTACGTCCA TAAAGACGGC CGGGTCGTCA CCCTATCCTG GACCTCGAAC
TGGTCGGAAC CGGTGCAGCG GCATTTCTTC ATCGGGCGCG ACATGACCGA AAGCCGGCTG
GCGCAGGAGA CCCTGCGCGA GAGCGAGCAG CTCGCCCGCA ACATCATTGA AACGGCGCTC
GACGCGTTCG TTCAGGTCGA CGCAAAGGGC GCCATCCTCA ACTGGAACTC CCAGGCCGAG
AAGATCTTCG GTTGGCCGCG CGCCGAAATC CTCGGCAAGG ACGTGTTCGA TCTGATCACG
ATCGACGACG AAGGCGAGGA ACTGCGTTCC GCGCTCGGTC GCATCGTGCT GACCGGAGAG
GCCAGCGCGC TCGGGATCGG CCGTCGGCGC GAGGTCATCG TGAGGCGCCG CGACGGCCGC
GACTTCAAGG CGGAAGTGAG CGTCACCGCG CTCAAGACCC GCAACGGCTT TGTCTTCAAC
GGTTTCTTCC GGGACCTGAC CGACAAGATC GCCGCCGAGG AGCGCATTCG GCAGTCAGAG
AAGATGGAGG CGATCGGCCA ACTCACCGGC GGCATCGCCC ACGACTTCAA CAATATCCTC
ACCGTGATCA CCGGCACCAT CGAGATTCTC GCTGCCGCTG TCGCCAAGGA GCCGCAGCTC
GCGGCCATCA CCAGGATGAT CGACGAGGCC GCCGCCCGCG GCGCCGACCT CACCCAGCAT
TTGCTCGCCT TCGCGCGCCG GCAGCCGCTG CAGCCGCGCG AGGTCGACGT CAACATGCTG
GTCATCGACA CGGCGAAGCT GCTGCGACCG ACGCTCGGCG AGCAGATCGA GATCGAGTCG
GTCTTCCAGG ACGAGACCTG CGCGGCCCAT GTCGACCCCA ACCAGCTTGC CACTGCGATC
ATCAACCTCG CGCTGAATGC CCGCGACGCG ATGCCGAGCG GCGGCAAGCT GATCTTGGAG
ACCGGCTGGG CCGACCTCGA CGAGAACTAT GCGAGTCTCT ACGATGACGT CCGGCCCGGG
CGCTATGCCA TGATCGCGGT CAGCGACAGC GGCAGCGGCA TTCCGGCAGC CATCATCGAC
AAGGTCTTCA ATCCGTTCTT CACGTCGAAG GGCCCAGGCA AGGGAACGGG GCTCGGACTG
TCCATGGTAT ACGGCTTCGT TAAGCAGTCC TCCGGCCATG TCAGGATCTA CAGCGAAGAG
GGACACGGCA CCACGATTCG CATGTATCTT CCCCCGGGTC GGGAGGGCGT GGCGATACCG
GCCGCGAGCG CCGCCCCGGC GATCGAGGGC GGGCACGAGA CGATCCTGGT GGTCGAGGAC
GACCGGCTGG TGCGAGGTTA CGTGCTTGCC CAGCTGCATG CGCTGGGCTA CGCGACCCTT
GAGGCCGCGA ATGCCGCCGA AGCCCTCGCG ATCGCCAATG GCGGTGAGCG CTTCGATCTG
TTGTTCACTG ACATCATTAT GCCGGGCACG ATGAATGGAC GGCAGTTGGC CTCAGAAATC
CAGCGGCTTC GCCCCGGACA GCGCGTGCTC TTCACGTCCG GATACACGGA GAACGCCATC
GTCCATCATG GACGGCTCGA CGAGGGACTG CTGCTGCTGC CGAAACCGTA TCGCAAATCC
GAGCTGGCCA AAATGATTCG GACTGCGCTC ACATCGGACT AG
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| Protein sequence | MGQQPGRAGS PDGREALGLG RRLTLTTRLA IAMILLVAMA VFAVGWLGYR SLESALLPRA
LDRIEAHSRL MATELENYVG GARNDLNGYR ASPNLATLIR TLKTGGPDPR EGLSAQSWRE
RVAMRYFAEL QAKTTYAMVR LVGIENNYRE LIRVDRLGPG GTVRIVPENE LITRGDRKYI
TETLQLAPGG IRVSPIILDG NTTDPKTGVP MLCVGTPVFS PDGKPFAILM LDLDMRPIFA
HLRSAARPGA QLYVVNARGD YLFHPESDRE FASKRGGSTR WQDDFPSLAS ATGSTQGFAR
ILHDDAKRPG GVAFAPAMLA GQEWVAVIET IPNTAFMAPA LAIRKTAIEV GLIAMLCAAA
LAFVVARSLT RPINQLTQAV ESVGRGESVK IPLEAVGETG VLARAFARVL EEVRAKTAEL
EREVQEHYLT EAARDHFAAR ERLYSAAVES SNDAIVTLAL DGTITAWNPA AETMLGYAAE
EAVGRQADFV VPADRMAEAQ DILLRVARGE RIQHFETVRI RKDGEHILVS LSVSPIKSPT
GQIIGASKIA RDITESRKTE QALRQQTEER RRIFETSQDL ILITDRSGIL VQVSPSVEAI
LGYTPAEMIG RNGADFIHPD DLQKARDELR ASRHGLSPRN SDGRYVHKDG RVVTLSWTSN
WSEPVQRHFF IGRDMTESRL AQETLRESEQ LARNIIETAL DAFVQVDAKG AILNWNSQAE
KIFGWPRAEI LGKDVFDLIT IDDEGEELRS ALGRIVLTGE ASALGIGRRR EVIVRRRDGR
DFKAEVSVTA LKTRNGFVFN GFFRDLTDKI AAEERIRQSE KMEAIGQLTG GIAHDFNNIL
TVITGTIEIL AAAVAKEPQL AAITRMIDEA AARGADLTQH LLAFARRQPL QPREVDVNML
VIDTAKLLRP TLGEQIEIES VFQDETCAAH VDPNQLATAI INLALNARDA MPSGGKLILE
TGWADLDENY ASLYDDVRPG RYAMIAVSDS GSGIPAAIID KVFNPFFTSK GPGKGTGLGL
SMVYGFVKQS SGHVRIYSEE GHGTTIRMYL PPGREGVAIP AASAAPAIEG GHETILVVED
DRLVRGYVLA QLHALGYATL EAANAAEALA IANGGERFDL LFTDIIMPGT MNGRQLASEI
QRLRPGQRVL FTSGYTENAI VHHGRLDEGL LLLPKPYRKS ELAKMIRTAL TSD
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