Gene BBta_0525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0525 
SymbolcheW 
ID5149300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp517902 
End bp518375 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content67% 
IMG OID640555539 
ProductCheW protein 
Protein accessionYP_001236712 
Protein GI148252127 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.936934 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGTA AGATCGAAGC CACTGACGGC GCGGCCTCCG AATTCGTGAC TGCCGTCATC 
GGCGGTCAGC TGTTCGGCCT GCCGATCTCG CGGGTGCAGG ACGTGTTCAT GCCGGAGCGT
GTCACGCGGG TGCCGCTGTC GTCGGCCGAG ATCGCCGGCG TGCTGAATCT GCGCGGCCGC
ATCGTCACCG TGATCGACAT GCGGGCGCGG CTCGGCCTTG CCAGGGCCGA CGACGGCAAG
CCGCCGATGG CGGTCGGCGT CGACCTGCGC GGCGAGTCCT ATGGCCTGCT GATCGATCAG
ATCGGCGAGG TGCTGCGGCT GCCAGAGGCG AGCCGGGAGG AAAATCCCGT CAACCTCGAT
CCGCGCATGG CCAAATTCGC CGGTGGTGTC CACCGCCTCG ATGGCCAGCT GATGGTCGTC
CTCGATGTCG ATCGCGTACT CGAGCTTCTG CCCAAGGCAG CTATCGCCGC CTAG
 
Protein sequence
MSSKIEATDG AASEFVTAVI GGQLFGLPIS RVQDVFMPER VTRVPLSSAE IAGVLNLRGR 
IVTVIDMRAR LGLARADDGK PPMAVGVDLR GESYGLLIDQ IGEVLRLPEA SREENPVNLD
PRMAKFAGGV HRLDGQLMVV LDVDRVLELL PKAAIAA