Gene BBta_0518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0518 
Symbol 
ID5148884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp509637 
End bp510026 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content58% 
IMG OID640555533 
Productputative response regulator receiver (CheY-like protein) 
Protein accessionYP_001236706 
Protein GI148252121 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.150153 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.211066 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTTG ATCTGTCGAT GCCGATCCTG GTGGTCGATG ACTACGCCAC TATGATCCGG 
ATCATCCGCA ACCTGCTGAA GCAGCTCGGA TTCGAGAACG TCGACGACGC CACTGATGGA
TCCGCCGCAC TCGCCAAGAT GCAGGCGAAG AAGTACGGCC TCGTGATCTC GGACTGGAAC
ATGGAACCGA TGACCGGCTA CGACCTGCTG CGTGAGGTCC GCGCCAGCCC CGAATTGTCC
AAGACTCCGT TCATCATGAT TACGGCGGAA TCCAAGACCG AGAACGTCAT CGCCGCCAAG
AAGGCCGGCG TCAGCAACTA CATCGTCAAG CCATTCAATG CGGCGACCCT CAAAACCAAG
ATGGAAGCCG TGTTCGGCCC GGCCGAATAG
 
Protein sequence
MAFDLSMPIL VVDDYATMIR IIRNLLKQLG FENVDDATDG SAALAKMQAK KYGLVISDWN 
MEPMTGYDLL REVRASPELS KTPFIMITAE SKTENVIAAK KAGVSNYIVK PFNAATLKTK
MEAVFGPAE