| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0512 |
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| Symbol | ipdC |
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| ID | 5156217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 502005 |
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| End bp | 503642 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640555527 |
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| Product | indole-3-pyruvate decarboxylase |
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| Protein accession | YP_001236700 |
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| Protein GI | 148252115 |
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| COG category | [G] Carbohydrate transport and metabolism
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3961] Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes |
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| TIGRFAM ID | [TIGR03394] indolepyruvate/phenylpyruvate decarboxylase, Azospirillum family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.396725 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.198842 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCTC TCGCTCATGT GCTGCTTGCC GCTCTGAGGG ACCACGGCGC CCGCGAGATC
TTCGGCATTC CCGGAGATTT CGTTCTGCCT CTGTTCAAGG TCATCGAGGA GAGCAGGATC
CTGCCAGCCG TCACGCTCAG TCACGAGCCG GCGGTCGGCT TTGCGGCGGA TGCCGCGGCC
CGTTATCACG GCGGCCTCGG CGTTGCCGTC GTGACCTATG GCGCCGGCGC GTTCAACCTC
GTGAACTCGG TCGCCGGCGC CTATGCCGAG CGCTCGCCCG TCGTGGTCAT TGCCGGCGCG
CCCGGCGCGC GCGAGCGCGT GTCCGGCTTC CTGCTGCACC ATCAGGCCCG CACGGTGGAT
ACCCAGCTTG CGGTGTTTAA GGAGATCACC TGCGATCAGG CCGTTCTCAG CGATCCGGCC
ACCGCGCCGG CGCAGATCGC GCGTGTGCTG CGCAGCGCAA AGGAAATGTC GCTGCCGGTC
TATCTCGAAT TCCCGCGCGA CATGGTCGAT GTCGAAGCCG AGCCGGTGGT GCCGCTGCCG
CCGCGGCGGG CCGATCAGGA CGCGCTCGGC GAGTGCGTCG AGGAGATCCT CGGCCGTATC
GCGCGCGCCG AGCGCCCGGT CATCGTGGTG GACGTGGAGA TCCGGCGTTA TGGAGTCGAG
GCCAGGATCG CGGCGCTGGC GCGCAAGCTG GGCCTGCCCC TGGTCACGAC CTTCATGGGA
CGCGGCTTGC TCGACCAGGC CGACGATGTC GTCGCCGGCA CCTATCTCGG CGCCGCGGGA
AATCCCGCGA TCACCGCGCT GGTCGAAGAT GCCGACCTGG TGCTGATGCT CGGCGTGATC
CTGTCGGATA CGAATTTTGC GCTGTCAAAC CGGGCACCGG ACCCGCGCCG CATGATCCTG
GCGGCGAGCT GCGAGGTGCA GATCGGGCAT CATGTCTATC GTGACATGCC GCTCGGCGAT
CTCATCGATG CGCTGGACGA TCGCGCAACA CCGCGCGCGG CGCCGGCCGA TCGCGTCCGG
CAGCGCTCGG CCTATCCGCG CGGTCTGGTC GCCGACAGCA ATCCGATCGC GCCGTCGGAC
ATCGCGACCG CGATCAACGA CATGTTCGAC CGCCATGGCC GGATGCCGAT GACCGCCGAT
ATCGGCGACT GCCTGTTCAC GGCGATGGAG ATCGATAACA CGGCGCTGGC TGCGCCCGGC
TACTATGCCG GGATGGGGTT TGGCGTGCCG GCCGGCATCG GGGTCGCGGC GACCGGGCTG
CGGCCGCTGA TCCTCGTCGG CGATGGGGCG TTTCAGATGA CCGGCTGGGA GCTCGGCAAT
TGCCGGCGCT ACGGTCTCGA TCCGATCGTG GTGCTGTTCA ACAATTGCAG CTGGGAGATG
CTGCGGGTGT TCCAGCCGGA ATCGCGCTTC AACGATCTCG ACGACTGGCA CTACGCCGAC
ATTGCCAAGT CCATCGGCGG TGTCGGCGAA CGCGTCACCA CGCGAGCCGA GCTTGTTGCC
GCGCTCGAAC GCGCCGTGGA ACGGCGCGGG CAGTTCTCGC TGGTCGAAGT GATGCTGCCC
CGTGGCAAGA CGTCGGACAC GCTGGCGCGC TTTGTTGCCG GCTTCAAGTC GGCGCGTGAG
CGGATGGCCG GAGGATGA
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| Protein sequence | MPALAHVLLA ALRDHGAREI FGIPGDFVLP LFKVIEESRI LPAVTLSHEP AVGFAADAAA
RYHGGLGVAV VTYGAGAFNL VNSVAGAYAE RSPVVVIAGA PGARERVSGF LLHHQARTVD
TQLAVFKEIT CDQAVLSDPA TAPAQIARVL RSAKEMSLPV YLEFPRDMVD VEAEPVVPLP
PRRADQDALG ECVEEILGRI ARAERPVIVV DVEIRRYGVE ARIAALARKL GLPLVTTFMG
RGLLDQADDV VAGTYLGAAG NPAITALVED ADLVLMLGVI LSDTNFALSN RAPDPRRMIL
AASCEVQIGH HVYRDMPLGD LIDALDDRAT PRAAPADRVR QRSAYPRGLV ADSNPIAPSD
IATAINDMFD RHGRMPMTAD IGDCLFTAME IDNTALAAPG YYAGMGFGVP AGIGVAATGL
RPLILVGDGA FQMTGWELGN CRRYGLDPIV VLFNNCSWEM LRVFQPESRF NDLDDWHYAD
IAKSIGGVGE RVTTRAELVA ALERAVERRG QFSLVEVMLP RGKTSDTLAR FVAGFKSARE
RMAGG
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