Gene BBta_0501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0501 
Symbol 
ID5156252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp494816 
End bp495742 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content68% 
IMG OID640555518 
ProductNAD-dependent deacetylase 
Protein accessionYP_001236691 
Protein GI148252106 
COG category[K] Transcription 
COG ID[COG0846] NAD-dependent protein deacetylases, SIR2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.330366 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTGTC CTCCCGTCCG GGATAAGACC GGTCGCGCGC ATTGGTTCAC CCCGGCCGAT 
CCGCGCTGCG CCGGTCTGGC GCAGGCGACC TTGGCCGCCT ACATCTGCGC CATGGTTGAT
CCCACCGCGC TGCAATCCTT TCTCCAGAGC CACAGCCGCA TCGTCGTGCT CACCGGCGCC
GGCTGCAGCA CCAATTCCGG CATTCCCGAT TACCGCGACA GCGACGGCCA ATGGAAGCGC
ACGCCGCCGG TGACCTACAA GGCCTTCATG GGAACCGAGG AGACCCGCCG GCGCTACTGG
GCGCGCAGCA TGGTCGGCTG GCGCCGCTTC GGCCGCGCGG TGCCGAACGG CGCGCATCAC
GCGCTGGCGC GGCTGGAAGC ACAGGGCCGC AGCTCGCTGC TGGTGACGCA GAACGTCGAC
CGGCTGCACC AGGCCGCCGG CGCCAGCAAC GTCATCGACC TGCATGGCCG GCTCGATCGC
GTCCGCTGCA TGGGCTGCGG CGCAACCTTG TCGCGCGCGT CATTCCAGGA TGAGCTGGCG
TCAGCCAACC CGCATTGGGG CGATCTCGAT GCAGCCGATG CGCCCGATGG CGACGCCGAT
CTCGACGGCG TCGATTTCAC AGCGTTCACG GTCCCGGCCT GTCATATTTG CGGCGGCATC
CTCAAGCCGG ATGTCGTGTT CTTCGGCGAG ACCGTGCCGC GCGAGATCGT TTCGACAGCG
CGCGATCACG TCGATCAGGC GGACGCCATG CTCGTCGTCG GCACATCCCT GATGGTCTAT
TCCGGCTTCC GCTTCGTCCG CGCCGCAGCG GAGCGCGGCA TTCCGATCGC CGTCGTCAAT
CTCGGCCGCA CCCGCGCGGA TGATCTCTTG TCACTCAAGG TGGAAGCGCC CTGCGACGAG
GCACTGGCGT TTCTGCTGGA GGGGTAG
 
Protein sequence
MACPPVRDKT GRAHWFTPAD PRCAGLAQAT LAAYICAMVD PTALQSFLQS HSRIVVLTGA 
GCSTNSGIPD YRDSDGQWKR TPPVTYKAFM GTEETRRRYW ARSMVGWRRF GRAVPNGAHH
ALARLEAQGR SSLLVTQNVD RLHQAAGASN VIDLHGRLDR VRCMGCGATL SRASFQDELA
SANPHWGDLD AADAPDGDAD LDGVDFTAFT VPACHICGGI LKPDVVFFGE TVPREIVSTA
RDHVDQADAM LVVGTSLMVY SGFRFVRAAA ERGIPIAVVN LGRTRADDLL SLKVEAPCDE
ALAFLLEG