Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0496 |
Symbol | |
ID | 5151750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 491015 |
End bp | 492094 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640555513 |
Product | spermidine/putrescine ABC transporter ATP-binding protein |
Protein accession | YP_001236686 |
Protein GI | 148252101 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0754513 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.366469 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGAGC CTGCGCCGCA TCTCGTCATC AGCGCCGTTT CGAAGCGCTT CGGCGCGGCC ACCGTGCTCG ATCGCGTCGA TCTCACGATC CGGCGCGGCG AGCTGGTCAC CTTGCTCGGC CCATCCGGCT GCGGCAAGAC CACCTTGCTG CGCGCCATCG CCGGCCTCTC GCCGCCGGAC ACTGGCACGA TCGCGCTTGC CGGGCGCGAC GTCACTCATG TGCCGCCGCA CCGGCGCAAT GTCGGCGTCG TGTTCCAGAG CTACGCGCTG TTTCCGCATC TCACCGTCGC GGGCAACGTC GCCTTCGGCC TGAAGGTGCG CGGCGCGCCG AAGGCGGAGA TCGATCGCGC AGTGCAGCGG GCGCTGGCGC TGGTCAAGCT CGGTCATCTC GGTGGCCGAC GCATCTCCGC ATTGTCGGGC GGCCAGCAGC AGCGCGTGGC GCTGGCGCGC GCGATCGCGG TCGAGCCCGA CGTGCTGCTG TTCGACGAGG CGCTGTCGGC GCTCGATCGC AAGCTGCGCG AGGAGATGCA GATCGAGCTG CGCCGCCTGC TGCAGGACGT CAAGGCGACC GCGATCTTCG TTACCCACGA CCAGGACGAG GCGCTGACGA TGTCGGATCG CGTCGCGGTC ATGAACAAGG GCCGCATCGA GCAGCTCGCG GCGCCGCGCG AGCTGTACGC GCGGCCTGCG AGTCTGTTCG CGCTCAATTT CGTCGGGCTG TCCACGCGCA TCGCAGGACA GGTGGTTGGC GGACAAGACG GCATGGTCGA TGTCGTGACC CCGGTCGGCC GTCTCTCGGC GCGTGGTGCG TTCCAGCTCG GCGCCTCGGT GATCGTCGCG ACGCGGCCCG AGCAGTTGCG CCTCGGCGCG GACCATGAGG CGAACTCCGC GAGCGGCCGC GTGCGCTCGG TCGTGTTCCA GGGCTCGCGG ACCCTCGTGG ACGTCGACGC CGGCGCCGGC GCGAGCCTGC TCGCCGAGCT GTCGGGACGC GAGGCCGAGG TGCCGCGCGT GCATGACGAG GTCCGCTTCG CCTGGCCGGC CGCCGAGACC TTCGCCTTCG CCGCCGAGGC GTCGCCATGA
|
Protein sequence | MSEPAPHLVI SAVSKRFGAA TVLDRVDLTI RRGELVTLLG PSGCGKTTLL RAIAGLSPPD TGTIALAGRD VTHVPPHRRN VGVVFQSYAL FPHLTVAGNV AFGLKVRGAP KAEIDRAVQR ALALVKLGHL GGRRISALSG GQQQRVALAR AIAVEPDVLL FDEALSALDR KLREEMQIEL RRLLQDVKAT AIFVTHDQDE ALTMSDRVAV MNKGRIEQLA APRELYARPA SLFALNFVGL STRIAGQVVG GQDGMVDVVT PVGRLSARGA FQLGASVIVA TRPEQLRLGA DHEANSASGR VRSVVFQGSR TLVDVDAGAG ASLLAELSGR EAEVPRVHDE VRFAWPAAET FAFAAEASP
|
| |