| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0496 |
|---|
| Symbol | |
|---|
| ID | 5151750 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 491015 |
|---|
| End bp | 492094 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640555513 |
|---|
| Product | spermidine/putrescine ABC transporter ATP-binding protein |
|---|
| Protein accession | YP_001236686 |
|---|
| Protein GI | 148252101 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0754513 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.366469 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGC CTGCGCCGCA TCTCGTCATC AGCGCCGTTT CGAAGCGCTT CGGCGCGGCC
ACCGTGCTCG ATCGCGTCGA TCTCACGATC CGGCGCGGCG AGCTGGTCAC CTTGCTCGGC
CCATCCGGCT GCGGCAAGAC CACCTTGCTG CGCGCCATCG CCGGCCTCTC GCCGCCGGAC
ACTGGCACGA TCGCGCTTGC CGGGCGCGAC GTCACTCATG TGCCGCCGCA CCGGCGCAAT
GTCGGCGTCG TGTTCCAGAG CTACGCGCTG TTTCCGCATC TCACCGTCGC GGGCAACGTC
GCCTTCGGCC TGAAGGTGCG CGGCGCGCCG AAGGCGGAGA TCGATCGCGC AGTGCAGCGG
GCGCTGGCGC TGGTCAAGCT CGGTCATCTC GGTGGCCGAC GCATCTCCGC ATTGTCGGGC
GGCCAGCAGC AGCGCGTGGC GCTGGCGCGC GCGATCGCGG TCGAGCCCGA CGTGCTGCTG
TTCGACGAGG CGCTGTCGGC GCTCGATCGC AAGCTGCGCG AGGAGATGCA GATCGAGCTG
CGCCGCCTGC TGCAGGACGT CAAGGCGACC GCGATCTTCG TTACCCACGA CCAGGACGAG
GCGCTGACGA TGTCGGATCG CGTCGCGGTC ATGAACAAGG GCCGCATCGA GCAGCTCGCG
GCGCCGCGCG AGCTGTACGC GCGGCCTGCG AGTCTGTTCG CGCTCAATTT CGTCGGGCTG
TCCACGCGCA TCGCAGGACA GGTGGTTGGC GGACAAGACG GCATGGTCGA TGTCGTGACC
CCGGTCGGCC GTCTCTCGGC GCGTGGTGCG TTCCAGCTCG GCGCCTCGGT GATCGTCGCG
ACGCGGCCCG AGCAGTTGCG CCTCGGCGCG GACCATGAGG CGAACTCCGC GAGCGGCCGC
GTGCGCTCGG TCGTGTTCCA GGGCTCGCGG ACCCTCGTGG ACGTCGACGC CGGCGCCGGC
GCGAGCCTGC TCGCCGAGCT GTCGGGACGC GAGGCCGAGG TGCCGCGCGT GCATGACGAG
GTCCGCTTCG CCTGGCCGGC CGCCGAGACC TTCGCCTTCG CCGCCGAGGC GTCGCCATGA
|
|---|
| Protein sequence | MSEPAPHLVI SAVSKRFGAA TVLDRVDLTI RRGELVTLLG PSGCGKTTLL RAIAGLSPPD
TGTIALAGRD VTHVPPHRRN VGVVFQSYAL FPHLTVAGNV AFGLKVRGAP KAEIDRAVQR
ALALVKLGHL GGRRISALSG GQQQRVALAR AIAVEPDVLL FDEALSALDR KLREEMQIEL
RRLLQDVKAT AIFVTHDQDE ALTMSDRVAV MNKGRIEQLA APRELYARPA SLFALNFVGL
STRIAGQVVG GQDGMVDVVT PVGRLSARGA FQLGASVIVA TRPEQLRLGA DHEANSASGR
VRSVVFQGSR TLVDVDAGAG ASLLAELSGR EAEVPRVHDE VRFAWPAAET FAFAAEASP
|
|---|
| |