| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0495 |
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| Symbol | |
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| ID | 5151749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 489984 |
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| End bp | 491018 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640555512 |
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| Product | spermidine/putrescine ABC transporter substrate-binding protein |
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| Protein accession | YP_001236685 |
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| Protein GI | 148252100 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.44949 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCCTT TCTCCCGCCG CAGCCTCCTG AAGACCGGTG CGGCCTTCGC CGCCACCTTC
GCCGCGCCAT CCCTGGTGCG CGCCGCCCCG AAAGAGATCG TGATTGGCGG CCCCGCCGGT
GCCGCCAAAT ATTTCAACGC CGACCTGTTT CCGGTGCTGG AGAAGAAGCT CGACTGCAAG
GTGCTCTATG AGGGCACCAA CTCGCTGACC AATCTGCAGA AGATGCAGGC CGACAAAGCG
AGCCCGAAGA TCTCGGTCGT GATCATGGAC GACCCGGTGA TGCTGCCGGC CGCGGCCGAA
GGGCTGATCA CCAAGATGTC GTCGTCGGCG ATTCCGAATC TCGGCAAACT GGTCGACGAT
GCCGTGCACC AGGACGGCAT GTGGGCCAAC TACCAGAAGC CCTGGGTCGG CATCGCCTAT
TCCACCAAGC GCATGAAGAC GGCACCGGTG AGCTGGGCCG AGCTGTGGGA TGCGAAATAC
GACTCCAAGA TCGTCGTGCC GTCGCTGTCC AACACCGAAG GGTTCTGGAC GCTGCTCGCC
GCCGCGCATC TCGAGACCGG CAAGCCTTAC AAGGAGGCGC AATACGAGAT CGACGCCGGC
TTCAAGAAGA TCAAGAGCCT GAAGGCCAAT CTGCTGAACG TCTATACCAA CGCGCCGCAG
GCCATCAATC TCCTGGAGCA GGGCGAGGCC TGGATGATCG GTGGCCAGTT CTCGGCCTAC
ACCTTGATCC GCAAGGCCGA TGGCTCGCCG GTCGATCTCG CCATTCCCAA GGATGGCGGC
TTCTCGATGC CGTCGGGCAT CGCCAAGGTC GCAGGCGCGC CGGCCGGCGA CCTCGCCGAC
GCCGTGATTG ACTTCTATCT CAGCCCGGAG GCGCAGACCA TTCTGGCCAA GACGGCCTTC
ATCGCGCCGA CCAGCAAGGC GACGCCGCTG CCGGCCGGCT ATCCGGATCC GGCCTCGCTG
TTCGCGCCCG ATTGGGCCTT CATTGCCAAG AACCGCGCCG GCTGGGTCGA TCGCTGGAGC
AAGGAGATGA CATGA
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| Protein sequence | MHPFSRRSLL KTGAAFAATF AAPSLVRAAP KEIVIGGPAG AAKYFNADLF PVLEKKLDCK
VLYEGTNSLT NLQKMQADKA SPKISVVIMD DPVMLPAAAE GLITKMSSSA IPNLGKLVDD
AVHQDGMWAN YQKPWVGIAY STKRMKTAPV SWAELWDAKY DSKIVVPSLS NTEGFWTLLA
AAHLETGKPY KEAQYEIDAG FKKIKSLKAN LLNVYTNAPQ AINLLEQGEA WMIGGQFSAY
TLIRKADGSP VDLAIPKDGG FSMPSGIAKV AGAPAGDLAD AVIDFYLSPE AQTILAKTAF
IAPTSKATPL PAGYPDPASL FAPDWAFIAK NRAGWVDRWS KEMT
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