Gene BBta_0494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0494 
Symbol 
ID5155830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp489044 
End bp489781 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content70% 
IMG OID640555511 
ProductGntR family transcriptional regulator 
Protein accessionYP_001236684 
Protein GI148252099 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.708073 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTGC AACGAATCGG GAAGGCCAAT CCCGCCGAGG ACGAGGCGGT GTACCAGGCC 
ATCCTGCGCG CGCTGCTGGA GGGCAAGCTG AAGGCCGGCA CCAAGCTCGC CGAGACACCG
CTGGCCGCGA TCTTCGGCGT GTCGCGCGAG CGCATCCGGA AAGTGCTGCA CCGGCTCGGC
GCCGAGCGAC GGCTGGAGAT GATCCCCAAC CGCGGCGCGC GGGTGCCGCG ACCGACGCTC
GACGATATCA GGCGGGTCTA TGAGGCGCAT CGCGTGCTCG AGGCCGGCGT GCTCAGCCAG
CTGGTTCTCA GGGTCGACGA GGTGCTGCTC GCGCAGCTCG ACACCCATCT CGAAGAGGAG
CGCGCCGCGG CGCGGCGCGG CGATCGCGCC GCCTCAGTCA GGCTGTCCGG GGCCTTCCAT
GTCCATCTCG TCGAGGCGCT GGGCAATCCC GAATTGTCCC GCATCCTCGC CGACCTGCTC
AGCCGCTCCT CGGTGATGGT CTCCGTCTAC GAGCCGGCGG CGCAGTCGAT CTGCGCGGTT
GATGAGCATG GCGCCATCGT CGCGGCGCTG CGCGACCGCG ACCTGATGCG GGCCATCGCG
GTGTCGCGCG AGCATTTCCT GCATGTCGAG GGCCGGCTCC GGCTCGACGA GGCCGCGGCC
TCGGAGAGCG AGGATCTTGC GGCGATCTTC ACACCTGTCA AACCGCTGCG GCGCAAGCCT
CGCTCAGCGC AATCGTGA
 
Protein sequence
MRVQRIGKAN PAEDEAVYQA ILRALLEGKL KAGTKLAETP LAAIFGVSRE RIRKVLHRLG 
AERRLEMIPN RGARVPRPTL DDIRRVYEAH RVLEAGVLSQ LVLRVDEVLL AQLDTHLEEE
RAAARRGDRA ASVRLSGAFH VHLVEALGNP ELSRILADLL SRSSVMVSVY EPAAQSICAV
DEHGAIVAAL RDRDLMRAIA VSREHFLHVE GRLRLDEAAA SESEDLAAIF TPVKPLRRKP
RSAQS