| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0478 |
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| Symbol | hypB |
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| ID | 5152666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 474068 |
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| End bp | 474781 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640555496 |
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| Product | hydrogenase nickel incorporation |
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| Protein accession | YP_001236669 |
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| Protein GI | 148252084 |
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| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
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| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.278517 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.249483 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGCACGGTC ACGACCATCC GCACGACCAT GATCACCCGC ACAGCCATGG CCATTCCTCG
GTCATCGAAC TCGAGACCCG GATCCTGGCC AAGAACGACG CGCTCGCGGC CAGGAACCGT
GGCTGGTTCG CCGGCCGCGA AATCCTGGCG TTGAACCTTG TTTCCTCGCC AGGCTCCGGC
AAGACGACGC TGCTCGAGCG CACCATCCGC GACCTCAAGG ACAAGATCCC GATCGCGGTC
ATTGAGGGCG ATCAGGCGAC CACCAATGAC GGTGAGCGTA TCCGCGCCGC GGGCGCTGCT
GCTGTCCAGG TCAACACCGG CGCCGGCTGC CATCTCGAAG CCGACATGGT GGCCAAGGGG
CTCGCCGAGC TGAAGCCGGC CTTCGGCTCC GTCGTCATAA TCGAGAATGT CGGCAACCTC
GTCTGCCCGG CGATGTTCGA TCTCGGCGAG CACGCCAAGG TGGTCATCCT CTCGGTCACC
GAGGGTGACG ACAAGCCGCT GAAGTATCCG CACATGTTCA GGGCTGCAGA GATCATGGTC
ATCAACAAGA TCGATCTTTT GCCGCATGTC GATTTCGACG TGGATATCGC TAACGCCAAT
GCGCGCCAGG TCAATCCGGA GATCGTCACG TTCAGCGTGT CGGCTCGGAC GGGAGAGGGA
CTCGGCGGCT GGTACGACTG GCTCGGCACC CAGGCGTCGC AAGCATGGCT TTGA
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| Protein sequence | MHGHDHPHDH DHPHSHGHSS VIELETRILA KNDALAARNR GWFAGREILA LNLVSSPGSG
KTTLLERTIR DLKDKIPIAV IEGDQATTND GERIRAAGAA AVQVNTGAGC HLEADMVAKG
LAELKPAFGS VVIIENVGNL VCPAMFDLGE HAKVVILSVT EGDDKPLKYP HMFRAAEIMV
INKIDLLPHV DFDVDIANAN ARQVNPEIVT FSVSARTGEG LGGWYDWLGT QASQAWL
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