| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0474 |
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| Symbol | hypD |
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| ID | 5153346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 471202 |
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| End bp | 472350 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640555492 |
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| Product | hydrogenase expression/formation |
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| Protein accession | YP_001236665 |
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| Protein GI | 148252080 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.982251 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.264843 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCG CCGACGAATT CCGTGACCGC GACAAGGCCA GGACGCTGGT CCGCGAAATC
GAAACGCTGG CCGACCAGAT CGAGACGACA AAGACGCGGC CGCTCCAACT CATGGAGGTG
TGCGGCGGCC ATACGCATTC GATCTTCCGC TATGGCCTGG AAGGCATGCT GCCTTCCTCG
ATCGAACTGG TGCACGGGCC TGGCTGCCCC GTCTGTGTGT TGCCCATGGG ACGGGTCGAT
GATTGCGTCG CGATCGCCGA GCGGCCCGGC GTGATCTTCA CCACCTTTGG CGACGCGATG
CGCGTGCCCG GATCGAAGAA AAGCCTCATG CAGGCCAAGG CCGACGGGGC GGATGTGCGG
ATGGTCTATT CGCCCATGGA CGCACTGGCT CTCGCGCGCA AGCATCCGGA TCGCGAGGTG
GTCTTCTTCG GGCTGGGCTT CGAGACCACT ATGCCGTCAA CCGCGCTGAC TGTGCTGCAG
GCCGAGGCCG ATGGAATCGA GAATTTCTCG GTCTTCTGCA ATCACATCAC CATCGTTCCG
ACTATCAAGG CGATACTCGA TAGCCCAGAT CTTCACCTCG ACGGGTTCCT CGGACCAGGC
CATGTGTCAA TGGTGATTGG CGCGGCGCCC TACGCATTCA TCGCCGAGTT CTACAAGCGT
CCAATGGTCA TCGCTGGATT CGAACCCCTC GATATCTTGC AGTCGATCTG GATGCTCCTG
AAACAGATCA GGGAGGGCCG TGCCGAGATC GAAAACCAGT ACACGCGCAT CGTTCCTGAA
GCCGGGAACC ATCCTGCGCT CGCCGCTGTT GCGGAGGTCT ATGAACTGCG CGAGTTCTTC
GAATGGCGTG GCCTCGGCTC GATTGACCAT TCCGGCGTCA AAGTGCGTGA TCAATACGCC
CGCTTTGATG CAGAGCGGAA ATTCGCTATC CCAAATGTCA AGATCGCCGA CCCTAAATCC
TGCCAATGCG GAGAAGTGCT CAAGGGCGTT TTGAAGCCTT GGCAGTGCAA GGTGTTCGGT
ACCCTCTGCA CGCCGGAAAC GCCGCTCGGC GCGCTAATGG TTTCCCCGGA AGGAGCCTGC
TCGGCCTACT ACCAGTATGG CGGGATTAAA CGTAGCAACA CTCCCGAGAA AGAGGCCGTA
GTGTCATGA
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| Protein sequence | MKFADEFRDR DKARTLVREI ETLADQIETT KTRPLQLMEV CGGHTHSIFR YGLEGMLPSS
IELVHGPGCP VCVLPMGRVD DCVAIAERPG VIFTTFGDAM RVPGSKKSLM QAKADGADVR
MVYSPMDALA LARKHPDREV VFFGLGFETT MPSTALTVLQ AEADGIENFS VFCNHITIVP
TIKAILDSPD LHLDGFLGPG HVSMVIGAAP YAFIAEFYKR PMVIAGFEPL DILQSIWMLL
KQIREGRAEI ENQYTRIVPE AGNHPALAAV AEVYELREFF EWRGLGSIDH SGVKVRDQYA
RFDAERKFAI PNVKIADPKS CQCGEVLKGV LKPWQCKVFG TLCTPETPLG ALMVSPEGAC
SAYYQYGGIK RSNTPEKEAV VS
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