Gene BBta_0458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0458 
Symbol 
ID5154210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp458042 
End bp459493 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content59% 
IMG OID640555477 
Producttwo-component response regulator protein 
Protein accessionYP_001236650 
Protein GI148252065 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.9933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.101135 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCACT CTGGTACGGT CCTCATCGTA GCTCGGCGGG GAGGCGATTG GACGGACTGC 
CTTGACGTCC TGTCCGAGCG CTATGCCTAT CGCGTGGTGC TTGTCGGCTC TGTAGCCGAA
GCGCTGACCA CGATGAGCGG CATCCATGTC GATCTTGCCG TTGCCGAAGA TCGGAAGGAC
GAGTCCATTG GCCTGGATTT TCTGACCAGG TTGCGCGTGT CCCACCCGGA AATCATGCGG
GTATATGTAG CCACGGGGGG ATCGCCTCTA TCCTACGGCA CATTGACCAA GGCCGCGATC
TACCAGTTCT TGCTCACCCC GCTCGACGCA ACGCAGCTCG GCCTCGTCGT CGAGCGGGCG
CTTGAAGCTC GCGAACTCGC CCGCCGCCAC CGCATTCTTT CGCGGGAGTT CAAGATCTCC
GGTGACGTAC TCAGATTAGG CGAGCGCCGG GATCTCCTCT TCAGGCCCGA AAGCCACCAA
TTCGAAAAGC TCGTCTATGC CAGCGAGAAA ATGGCAGAGC TGTGTGATTT GGCCAAACAA
GCCGCCACAA CAGAATTGCC GATCTTGATT CAGGGTGAGA CCGGAACGGG CAAGGAGCTT
TTGGCGCGCG CTATCCATTA CAATTCGCCA CGACGCACGA GCCCGCTCCT CATCCAGAAC
TGCGGCGGCA TGCCGGACGA CTTGCTGCAA TCAGAATTGT TCGGCCATAA ACGCGGCGCC
TTCACCGGCG CCATCTCCGA CCGCCTCGGC CTCTTTCGCG CCGCCGATGG CGGCACGGTA
TTCCTCGACG AGATTTCGGA GGTGTCCCCA TCTTTCCAGG TGAGCCTGCT GCGCTTTCTC
CAGGAGGGCG AGGTCAAACC GCTTGGCTCT GACAAAGTCG AGCACTGTAG CGTTCGCATC
ATTGCCGCCT CGAACAGGTC GCTCAAAGAC ATGGTCGCCC GGCGGGAATT TCGCCAGGAT
CTCTATTTCC GCCTCAAAGG TTTCGAGCTT GAGGTGCCTC CGCTTCGTGA GCGCCGCGAC
GATATCGCGC CCCTTTCCGA ATTCTTCGCC GCGAAGCATG CCGATGGGAT GGGTCGGAAG
ATCCTCGGCA TCACAGCGAG CACGATCGAG AAGCTTTCCG CTTGCGACTT CCCCGGCAAT
GTCCGTGAGC TTGAGAACGA AATCCGGCGC ATGGTTGCAT TGGCCAAGGA CGGCGAATAC
ATCACCACGC GCAATATGTC GGCTTCGTTG TTGGCATCTG CCGCGGCGCG CAGTCGAAGC
GATGGACCAC GTGGCTTTGT ACCCGAAGGC GCGACCTTGA AGGATCGAGT AGAAAGTCTG
GAGAAGCAGA TCGTCGGAAG TGCGCTGTTG CGCAACCACT GGAACCAAAG CCGCACAGCC
GCTGAACTTG GCCTATCGCG CGTTGGACTT TCAAACAAGA TCAAGCGCTA CAACCTCGAG
CAACAAGGCT AG
 
Protein sequence
MEHSGTVLIV ARRGGDWTDC LDVLSERYAY RVVLVGSVAE ALTTMSGIHV DLAVAEDRKD 
ESIGLDFLTR LRVSHPEIMR VYVATGGSPL SYGTLTKAAI YQFLLTPLDA TQLGLVVERA
LEARELARRH RILSREFKIS GDVLRLGERR DLLFRPESHQ FEKLVYASEK MAELCDLAKQ
AATTELPILI QGETGTGKEL LARAIHYNSP RRTSPLLIQN CGGMPDDLLQ SELFGHKRGA
FTGAISDRLG LFRAADGGTV FLDEISEVSP SFQVSLLRFL QEGEVKPLGS DKVEHCSVRI
IAASNRSLKD MVARREFRQD LYFRLKGFEL EVPPLRERRD DIAPLSEFFA AKHADGMGRK
ILGITASTIE KLSACDFPGN VRELENEIRR MVALAKDGEY ITTRNMSASL LASAAARSRS
DGPRGFVPEG ATLKDRVESL EKQIVGSALL RNHWNQSRTA AELGLSRVGL SNKIKRYNLE
QQG