| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0454 |
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| Symbol | rpe |
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| ID | 5154516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 454620 |
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| End bp | 455351 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640555473 |
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| Product | ribulose-5-phosphate 3-epimerase |
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| Protein accession | YP_001236646 |
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| Protein GI | 148252061 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0801863 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGTTCG ATCGCTCCAT CAAGATCGCA CCTTCCATCC TCAGCGCCGA CTTCGCCGCT
TTCGGTGCCG AATGCCGCGC TATCGAAGCA CAAGGCTGCG ATTGGGTGCA TGTCGACGTG
ATGGACGGCC ATTTCGTACC GAACATTACC TTTGGCCCGC AACTCTGCAG GGCCATCCGG
CCGCACGTGA AGACGGTCAT GGATGTACAT TTGATGATCA CTCCAGTGGA CCCCTACATT
CACGCATTCG CCGAGGCGGG CGCCGACGTC ATCACCGCAC ATGTCGAGGC TGGCCCGCAT
CTTGACCGGA CCTTGCAAGC CATCCGCGCC GCCGGCGCTA AAGCGGGCGT CTCGCTTAAC
CCGTCCACGC CAGCGGAAGC GATCGAATTC GTCCTCGACC GGATCGACCT GGTCCTCGTG
ATGACCGTCA ACCCCGGCTT CGGCGGGCAA AGCTTCATCG AGGCCATGGT CCCGAAGATC
CGCCGTTTGC GCGAGATGGT TGGCGACCGG CCTATTCATA TCGAGGTTGA TGGCGGTGTA
ACGCCCGCGA CGGCGCCGCT CGTCGCAGCC GCTGGCGCCG ACGTGTTGGT CGCAGGATCA
GCTGTCTTCA AAGGCGGATC GGCTGCCGAC CCTGCACCCT ATGGGCGGAA CATCTTGGCC
ATCCGTGAAG CTGCGACTGC GGCGCAGAGA AAGGTGGCGG AAGCCGATGG CACTCGTGGA
CATTGGACAT GA
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| Protein sequence | MTFDRSIKIA PSILSADFAA FGAECRAIEA QGCDWVHVDV MDGHFVPNIT FGPQLCRAIR
PHVKTVMDVH LMITPVDPYI HAFAEAGADV ITAHVEAGPH LDRTLQAIRA AGAKAGVSLN
PSTPAEAIEF VLDRIDLVLV MTVNPGFGGQ SFIEAMVPKI RRLREMVGDR PIHIEVDGGV
TPATAPLVAA AGADVLVAGS AVFKGGSAAD PAPYGRNILA IREAATAAQR KVAEADGTRG
HWT
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