Gene BBta_0442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0442 
Symbol 
ID5155762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp441552 
End bp442694 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content65% 
IMG OID640555461 
Producttransposase 
Protein accessionYP_001236634 
Protein GI148252049 
COG category[L] Replication, recombination and repair 
COG ID[COG3547] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.145361 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.540344 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGGA CTGCGCTGGA GGGATTTGGC AAGACCCTGC TGGCCAATGA TGAGGTGGTG 
GTTGAAGCGA CCGCCAACAG CATGGCGGTG TCGCGGGTTC TGGCGCCGTT CGTGGCGCGG
GTGATTATCG CGAATCCGTT GCAGGTGAAG GCGATCGCCC AGGCTCACGT CAAGACCGAC
AAGATCGATG CCGGCACGCT CGCCAGTCTG CAGGCGGCCG GGTATCTGCC GCAGATCTGG
ACGCCGGACG CGGAGACCGA ACGCAAGCGT CGGCTGGTGG CGCGGCGCTA CCAGGTTGTG
CGGCATCGCA CGCGGCTCAA GAACGAGGTG CATTCGATCC TGCACGCGCA CCTGATCCCG
AAGTGCCCGC ATGCCGATCT TTTCAACGCC CGCGGCCGGG CGTGGTTGGC CGCTCAACAG
TTGCCGGACG ATGAGCGCGC AGCGATCGAT CGGCACGTCC GTGAGCTTGA CCGTTTGGCG
GAAGATCTGG CCCTGCTCGA CCGCGAGATC GCGCAGGACG CCATCGACGA TTCCGCGGTC
AACAGATTGA TGACGATCAC CGGCGTCAAT CTGGCGGTCG CCGCCGGCAT CGTGGCGGCG
ATCGGCGACG TCAGCCGGTT CAGCAGCCCA CAGAAGCTGG TGAGCTATTT CGGGCTGAAC
CCGCGGGTGC GGCAGTCGGG GTTGGTAGCG GCCCACCACG GCCGCATCAG CAAGATCGGC
CGTTCTCACG CGCGCGCCAT ACTGGTCGAG GCGGCCTGGG CAGCGGCCAA GGCGCCCGGC
CCACTGCATG CGTTTTTCGT GCGCATCCGC GCTCGGCGCG GTCATCAGAT CGCTGCGGTG
GCCGTGGCTC GCAAGCTCAC TGTGCTTTGC TGGCATTTGC TGACGAAGGG CGAAGATTAC
CTGTGGGCGC GCCCAGCGCT GGTCGCCAAC AAGACCCGCG CAATGCAACT TCAAGCCGGA
CATCCGCAAC AGAAAGGTAA CCGGCGTGGA CCTGCCTACG CCTACAACAT CAAGGCGCTG
CGCGACCGCG AGATGGTGAT TGCCGCCCAG GCGGAGCGAA ACTACGAACA ATTCGTGTCG
CAATGGAAAC CGCGGCGGCC AAAAACCGGC GCGCGGGCGC CTCAGCTCGG CAGGACAAAA
TAG
 
Protein sequence
MTRTALEGFG KTLLANDEVV VEATANSMAV SRVLAPFVAR VIIANPLQVK AIAQAHVKTD 
KIDAGTLASL QAAGYLPQIW TPDAETERKR RLVARRYQVV RHRTRLKNEV HSILHAHLIP
KCPHADLFNA RGRAWLAAQQ LPDDERAAID RHVRELDRLA EDLALLDREI AQDAIDDSAV
NRLMTITGVN LAVAAGIVAA IGDVSRFSSP QKLVSYFGLN PRVRQSGLVA AHHGRISKIG
RSHARAILVE AAWAAAKAPG PLHAFFVRIR ARRGHQIAAV AVARKLTVLC WHLLTKGEDY
LWARPALVAN KTRAMQLQAG HPQQKGNRRG PAYAYNIKAL RDREMVIAAQ AERNYEQFVS
QWKPRRPKTG ARAPQLGRTK