Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0442 |
Symbol | |
ID | 5155762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 441552 |
End bp | 442694 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640555461 |
Product | transposase |
Protein accession | YP_001236634 |
Protein GI | 148252049 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.145361 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.540344 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCGGA CTGCGCTGGA GGGATTTGGC AAGACCCTGC TGGCCAATGA TGAGGTGGTG GTTGAAGCGA CCGCCAACAG CATGGCGGTG TCGCGGGTTC TGGCGCCGTT CGTGGCGCGG GTGATTATCG CGAATCCGTT GCAGGTGAAG GCGATCGCCC AGGCTCACGT CAAGACCGAC AAGATCGATG CCGGCACGCT CGCCAGTCTG CAGGCGGCCG GGTATCTGCC GCAGATCTGG ACGCCGGACG CGGAGACCGA ACGCAAGCGT CGGCTGGTGG CGCGGCGCTA CCAGGTTGTG CGGCATCGCA CGCGGCTCAA GAACGAGGTG CATTCGATCC TGCACGCGCA CCTGATCCCG AAGTGCCCGC ATGCCGATCT TTTCAACGCC CGCGGCCGGG CGTGGTTGGC CGCTCAACAG TTGCCGGACG ATGAGCGCGC AGCGATCGAT CGGCACGTCC GTGAGCTTGA CCGTTTGGCG GAAGATCTGG CCCTGCTCGA CCGCGAGATC GCGCAGGACG CCATCGACGA TTCCGCGGTC AACAGATTGA TGACGATCAC CGGCGTCAAT CTGGCGGTCG CCGCCGGCAT CGTGGCGGCG ATCGGCGACG TCAGCCGGTT CAGCAGCCCA CAGAAGCTGG TGAGCTATTT CGGGCTGAAC CCGCGGGTGC GGCAGTCGGG GTTGGTAGCG GCCCACCACG GCCGCATCAG CAAGATCGGC CGTTCTCACG CGCGCGCCAT ACTGGTCGAG GCGGCCTGGG CAGCGGCCAA GGCGCCCGGC CCACTGCATG CGTTTTTCGT GCGCATCCGC GCTCGGCGCG GTCATCAGAT CGCTGCGGTG GCCGTGGCTC GCAAGCTCAC TGTGCTTTGC TGGCATTTGC TGACGAAGGG CGAAGATTAC CTGTGGGCGC GCCCAGCGCT GGTCGCCAAC AAGACCCGCG CAATGCAACT TCAAGCCGGA CATCCGCAAC AGAAAGGTAA CCGGCGTGGA CCTGCCTACG CCTACAACAT CAAGGCGCTG CGCGACCGCG AGATGGTGAT TGCCGCCCAG GCGGAGCGAA ACTACGAACA ATTCGTGTCG CAATGGAAAC CGCGGCGGCC AAAAACCGGC GCGCGGGCGC CTCAGCTCGG CAGGACAAAA TAG
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Protein sequence | MTRTALEGFG KTLLANDEVV VEATANSMAV SRVLAPFVAR VIIANPLQVK AIAQAHVKTD KIDAGTLASL QAAGYLPQIW TPDAETERKR RLVARRYQVV RHRTRLKNEV HSILHAHLIP KCPHADLFNA RGRAWLAAQQ LPDDERAAID RHVRELDRLA EDLALLDREI AQDAIDDSAV NRLMTITGVN LAVAAGIVAA IGDVSRFSSP QKLVSYFGLN PRVRQSGLVA AHHGRISKIG RSHARAILVE AAWAAAKAPG PLHAFFVRIR ARRGHQIAAV AVARKLTVLC WHLLTKGEDY LWARPALVAN KTRAMQLQAG HPQQKGNRRG PAYAYNIKAL RDREMVIAAQ AERNYEQFVS QWKPRRPKTG ARAPQLGRTK
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