| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0435 |
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| Symbol | |
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| ID | 5154978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 435951 |
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| End bp | 438857 |
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| Gene Length | 2907 bp |
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| Protein Length | 968 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640555454 |
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| Product | conjugal transfer relaxase TraA |
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| Protein accession | YP_001236627 |
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| Protein GI | 148252042 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR02768] Ti-type conjugative transfer relaxase TraA |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.441479 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATCT ACCATTTCTC CGTTCAGGTC ATCGGACGCG CGGCGGGCCG CAGCGCGGTC
GCAGCCGCCG CCTACCGTTC GGCCTCGCGG CTGCGGGACA ACCGGCTAGG CCGCGATCAG
GACTTTTCCG CCAAGCGCGG CGTGGTTCAT TCCGAGGTCA TGCTGCCGGA GAACGCGCCG
GAGGAATGGC ACGACCGCGA AAAGCTCTGG AACGATGTCG AAGCGTTCGA GAAGCGGAAG
GACGCCCAGC TTTGCCGCGA GGTGGAGTTC GCTATCCCGC GCGAGATGCC GCAGGCGCAG
GGCGTCGAAC TCGCCCGCGA CTTCGTGAAG GCCGAGTTCG TGGATCGGGG CATGATCGCC
GACCTCAACG TGCATTGCGA CATGGGCGCG GACGGCCAGC CCAAGCCCCA CGCCCACGTC
ATGCTCACCA TGCGGTCGGT GGACGAGAAC GGTTTCGGCC CGAAGGCGCG GGACTGGAAC
CGCACGGAGT TTGTGGAGCA TTGGCGCGAG CGTTGGGCCG ATCATGTCAA CGAGCGGCTG
GCCGAACTCG ACATCGACGC GCGGATCGAC CATCGCAGCC TTGAGGCCCA GGGCATCGGC
CTTGAACCGC AGACCAAGAT CGGCGCGCCC GCGCAACGCA TCGAGGCCGC CGGGCTTGAG
GCCGACCGCG CCGAGGACCA CAGGCGCATC GCCCGCGAGA ATGGCGCGCG GATCGTCGCC
GATCCGTCCA CCGCGCTTGA CGCGATCACG CGGCAGCAAT CGACCTTCAC TCGGCGTGAC
CTGGCGATGT TCGCGCACCG GCACAGCGAC GGCGTGGAGC AGTTCAACGA AGTGATGGGC
GCGATGCGTA ACGCGCCCGA TCTTGTCGAA CTCGGCAAGG ACGGTCGCGG CGAGGAGCGT
TTCACGACCC GCGAGATGAT CGAGGCAGAA CAGCGCCTGC ATCGGGCCGC CGCGATGATG
GCTGAACGGG AACGTCATGA GGTCAGCGGC AGGAACCGCG AAGCCGCATT GGCCCGCGCG
GCGGATCGCG GCCTTGTCCT GTCCGGCGAG CAGGCTGAGG CGCTGGCGCA TGTCACGGAC
GGACGCGATC TTGGCATTGT GGTGGGGTAT GCCGGAACGG GCAAGAGCGC GATGCTGGGT
GTGGCGCGCG AGGCTTGGGA GGATGCCGGT TACACCGTGC GCGGCGCGGC CCTGTCCGGT
ATCGCCGCCG AGAATCTGGA GGGCGGATCA GGCATCGCAT CGCGCACCAT CGCCAGCATG
GAGCATGGTT GGGCGCAGGG CCGCGACCTT CTCACATCCC GCGATGTGCT TGTCATCGAC
GAGGCGGGCA TGGTCGGCAC GCGGCAGTTT GAGCGCGTGC TGTCCCATGC CGCCGACGCG
GGCGCGAAGG TCGTGCTGGT CGGCGATCCG CAGCAGTTGC AATCCATCGA GGCGGGCGCG
GCGTTCCGTT CGATCCACGA ACGCCACCGC GGCGCGGAGA TGGGCGAGGT GCGCCGCCAG
CGGCAGGACT GGCAGCGCGA CGCCACCCGC GACCTGGCGA CCGGCCGAAC CGGCGACGCG
ATCCATGCCT ATGACGCGCA TGGCATGGTG CATGAGGCCG CATCACGCGA GCAGGCGCGC
GGCGAATTGA TCGACCGCTG GGACCGCGAG CGGCAGGCGA ACCCGGACGC AAGCCGCATC
ATCCTCACTC ACACCAATGC CGAGGTGCGC GCGCTAAACG AGGTGGCGCG TGGGCGGATG
CGTGAAGCCG GAAACCTTGG CGACGACGTG TATGTCGCCG CCGAACGCGG TGCCCGGAAC
TTCGCACCTG GCGACCGCGT GATGTTCTTG GCTAACGAGC GCGGGCTTGG CGTGAAGAAC
GGCACGCTCG GGACCATCGA GCAAGTCAAC GCCCAGAGCA TGACCGTGCG CACCGATGAC
GGCCGCGATG TGGCGTTCGA CCTGAAGGAC TACAATCGCA TCGACCACGG CTATGCCGCG
ACGATCCACA AAGCGCAGGG TATGACCGTG GATCGCGCCC ATGTGCTGGC GACACCGGGC
ATGGACGCTC ACGGCAGCTA TGTCGCCCTC TCGCGCCACC GCGACGGTAT GGACCTGCAC
TATGGCCGCG ACGACTTCGC CAGTCAGGAC AAGCTCATTA GCGTCTTATC ACGCGACCGG
GCCAAGGACA TGGCGAGCGA CTACGAACCC GCCCGCGACT ATGCCGAACG GCGCGGCATC
ACCTTCCGCG AGCGCGTGGA CCGGGTCGTC GAGATTGTCC GCCAAGTGCC CGAAAAGGTG
CGCGGCATGT TCGACGGGTT GCGCCTGCCC GCCGAGAGCG AACAGGGGCC GGAAAGGAAG
GTAGAGGAAG ACCCCGAGGA AGCTTTGCGC CGCTCCCGTG GCCGGGCGCT CGTCCGCCAT
GCCCGCGCCG TCGATGCGAT CTTCACGGCG CAGGACCAGG GCGGCAGGGC CAGCCCCGAT
CAGATCAGGG AATTGCAGGA GGCGCGCCAG CGGTTCGAGG AGGTGCGCCC CTACGGCTCG
CATGACGCTG AGGCGGCCTA CAAGAAAAAC CCGGAGCTTG CGGCGGAGGC GGCGTTAGGC
GACGCCCGGC GCGCGATCCG CGCCCTGCAA CTGGAAACCG AGCTGCGCAC CGAACCGGCC
CGCCGCGCCG ACCGTTTCGT GGAACGCTGG CGAAATCTGC ACAGGGCCAG TGAGGAACGC
TATGCGGCGG GCGACTATGC CGGCCATCGG GCCGCGCGGA CGGAAATGGG GAACATGGCG
CAGAGCCTCG AACGCGACCC GCAAATGGAG TCCCTTCTGG CGGGCCGCAA GCGGGAACTC
GGCATCTCAT TCGATTCGGG GATGAGCGTC GGCCGCGACC TCACCCTCAC GTTCGGGCTC
GGTCGGGGCC GGGGTCTCGG GTTGTAG
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| Protein sequence | MAIYHFSVQV IGRAAGRSAV AAAAYRSASR LRDNRLGRDQ DFSAKRGVVH SEVMLPENAP
EEWHDREKLW NDVEAFEKRK DAQLCREVEF AIPREMPQAQ GVELARDFVK AEFVDRGMIA
DLNVHCDMGA DGQPKPHAHV MLTMRSVDEN GFGPKARDWN RTEFVEHWRE RWADHVNERL
AELDIDARID HRSLEAQGIG LEPQTKIGAP AQRIEAAGLE ADRAEDHRRI ARENGARIVA
DPSTALDAIT RQQSTFTRRD LAMFAHRHSD GVEQFNEVMG AMRNAPDLVE LGKDGRGEER
FTTREMIEAE QRLHRAAAMM AERERHEVSG RNREAALARA ADRGLVLSGE QAEALAHVTD
GRDLGIVVGY AGTGKSAMLG VAREAWEDAG YTVRGAALSG IAAENLEGGS GIASRTIASM
EHGWAQGRDL LTSRDVLVID EAGMVGTRQF ERVLSHAADA GAKVVLVGDP QQLQSIEAGA
AFRSIHERHR GAEMGEVRRQ RQDWQRDATR DLATGRTGDA IHAYDAHGMV HEAASREQAR
GELIDRWDRE RQANPDASRI ILTHTNAEVR ALNEVARGRM REAGNLGDDV YVAAERGARN
FAPGDRVMFL ANERGLGVKN GTLGTIEQVN AQSMTVRTDD GRDVAFDLKD YNRIDHGYAA
TIHKAQGMTV DRAHVLATPG MDAHGSYVAL SRHRDGMDLH YGRDDFASQD KLISVLSRDR
AKDMASDYEP ARDYAERRGI TFRERVDRVV EIVRQVPEKV RGMFDGLRLP AESEQGPERK
VEEDPEEALR RSRGRALVRH ARAVDAIFTA QDQGGRASPD QIRELQEARQ RFEEVRPYGS
HDAEAAYKKN PELAAEAALG DARRAIRALQ LETELRTEPA RRADRFVERW RNLHRASEER
YAAGDYAGHR AARTEMGNMA QSLERDPQME SLLAGRKREL GISFDSGMSV GRDLTLTFGL
GRGRGLGL
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