Gene BBta_0413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0413 
Symbol 
ID5155428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp416713 
End bp417936 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content69% 
IMG OID640555431 
Producthypothetical protein 
Protein accessionYP_001236605 
Protein GI148252020 
COG category[S] Function unknown 
COG ID[COG2861] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.263106 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAGA CGGCCGACGA GCTGAGCGCC CCGCTCGGAC AGACGGAGAA GCGTCGCAGG 
CGCCGCATTC GGCTTCCCTT CACGCTCCTG CAGGCTCTCG CCGTGCTGCT CGGCCTGTTC
CTGGTGGTGT TCGCCGGCTT CGCTCTGTTC GGCGACAATC CGCTCGGCGG CGAGCCGATT
GCCCGGATCG CGATCAACGC GGGCGCCAAG CCGGACGACA AATCGGGCGC TGCAAAACCG
GACGCCAAGC ATGGGGCGAC GGCCGAGCAC GGCGCTGCCG CGCCGGCCAA GCAGGACGGC
GGCGACCGCA AGACGGTCAC CATCATCGAT GGATCCAGCG GCGCGCGCCA GGAGGTGGCG
ATCGGCGGCG GTGGCAGCGA GACAGCCGAA CCCGGCGCGG CTGCGCCGGC GGCGAGCCAG
ATGCCGGGCG TCGATCCGCG GCTGCTGGAG AAATCGCGCT ACGGCATGAT CCCGGTAATG
GCCGATGGCG TGAAGCCGTT CACCGCCTAT GCGGCCGAGG CCGACCGGGC CAAGGCCGCC
CGGATGCCGG CCGTCGCCAT CGTGATCGGC GGTCTCGGCG TCGGCGCGGC CAAGACGGTC
GAGGCCATCA TGAAGCTGCC ACCGGCCGTG ACCCTGGCCT TCACCCCGTA TGGCGCCGAC
CCGACCAAGC TGGCCGAGCG GGCGCGGGCG CAGCGCCATG AGATCCTGCT GCAGGTGCCG
ATGGAGCCCT ACGACTATCC GGACAATGAT CCGGGACCGC AGACGCTGCT CGCCACGCTT
GGGCCGGACC AGAACATCGA CCGCCTGTTC TGGCACATGA GCCGGCTGCA GGGCTATGTC
GGTATCGGCA ATTTCATGGG CGCGCGTTTT GTCGCCACCG AAGCGGCGAT GCAGCCGATC
GTGAACGAGG CTGCCAAGCG CGGGCTTGCA CTGTTCGATG ACGGCGCCGC GCCACGCAGC
GTGGCCGCCT CGCTGGCCGC CGGGCGCGCC ATGCCGTTCG CCAAGGGCGA TGTGGCCATC
GACGCGGTGC CGACGCCGGT CGAAATCGAC AATGCGCTCG CCAAGCTGGA AAGCCTCGCC
AAGGAGCGCG GCATCGCGAT CGGCACCGCC TCCGCTTTGC CGGTCTCGAT CGATCGCATC
GGGGCCTGGA TCAAGGGGCT CGATCGCAAG GGCATTCTGC TGGTGCCATT GACAACTGCG
ATGCTGAAAT CAAAATCGAA CTGA
 
Protein sequence
MTETADELSA PLGQTEKRRR RRIRLPFTLL QALAVLLGLF LVVFAGFALF GDNPLGGEPI 
ARIAINAGAK PDDKSGAAKP DAKHGATAEH GAAAPAKQDG GDRKTVTIID GSSGARQEVA
IGGGGSETAE PGAAAPAASQ MPGVDPRLLE KSRYGMIPVM ADGVKPFTAY AAEADRAKAA
RMPAVAIVIG GLGVGAAKTV EAIMKLPPAV TLAFTPYGAD PTKLAERARA QRHEILLQVP
MEPYDYPDND PGPQTLLATL GPDQNIDRLF WHMSRLQGYV GIGNFMGARF VATEAAMQPI
VNEAAKRGLA LFDDGAAPRS VAASLAAGRA MPFAKGDVAI DAVPTPVEID NALAKLESLA
KERGIAIGTA SALPVSIDRI GAWIKGLDRK GILLVPLTTA MLKSKSN