Gene BBta_0412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0412 
SymbolnudH 
ID5155427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp416129 
End bp416635 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content65% 
IMG OID640555430 
Productdinucleoside polyphosphate hydrolase 
Protein accessionYP_001236604 
Protein GI148252019 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.309928 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGCT ACGAGGACCT GCCTTACCGC ACCTGCGTCG GCATCGCGCT GATCAACTCG 
GAAGGGCTGG TGTTCATCGG TCGCCGCGCT GGCGGCATCG AGCATGTCGA CGACGCCCAT
GTCTGGCAGA TGCCGCAAGG CGGCGTCGAT CCCGGTGAAG ACGCCTGGGA GGCGGCCAAG
CGCGAGCTTT ATGAGGAGAC CAGCGTCCGT TCCGTCGAGA AGCTGGCCGA GATCGACGAC
TGGCTGACCT ACGATATTCC CCGCACCGTG GCCGGCCGGG CCTGGAAAGG ACGCTATCGC
GGCCAGCGGC AGAAATGGTT TGCCCTGCGC TTCACGGGAA CGGATACCGA GATCGACGTC
GAGCGTCCGG GCGGCGGCGT CCACAAGGCC GAATTCATCA GCTGGCGCTG GGAGCCGATG
CAGAACCTGC CGACGCTGAT CGTGCCGTTC AAGCGGCCGG TCTATGAGCG CGTGGTCAAG
GAATTCGCCG CCCTCGCCGG CAAGTGA
 
Protein sequence
MTRYEDLPYR TCVGIALINS EGLVFIGRRA GGIEHVDDAH VWQMPQGGVD PGEDAWEAAK 
RELYEETSVR SVEKLAEIDD WLTYDIPRTV AGRAWKGRYR GQRQKWFALR FTGTDTEIDV
ERPGGGVHKA EFISWRWEPM QNLPTLIVPF KRPVYERVVK EFAALAGK