Gene BBta_0411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0411 
SymbolnudH 
ID5155426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp415468 
End bp415989 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content66% 
IMG OID640555429 
Productdinucleoside polyphosphate hydrolase 
Protein accessionYP_001236603 
Protein GI148252018 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.229765 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGAGA GCATGACCGA AACCAGACCC TACCGGCCGA ATGTCGGCAT CGCCCTGTTC 
AATGCCGACG GCCTCGTTTT TCTCGGACGT CGCTTTCGCG ACGATGGACC GGAGATCATC
CTGCCTGGCC TCGAATGGCA GATGCCGCAA GGCGGCGTCG ATCCCGGCGA GGACCTGCAG
GCGGCCGCCC GGCGCGAGCT GTGGGAGGAG ACCGGCATTC GCGACGCCGA GATTCTCGGC
GAATCCGACT GGCTGACCTA CGAGTTTCCG CCGTTCAAGG ATCCCAACCA CCGCCTCGCC
GGCTTTCGCG GCCAGCGCCA GAAATGGTTT GCCATGCGCT TCACGGGACG CGAGGCGGAC
ATCGACCCGG TGACGCCGCG CAATGGCCAG CCGGCGGAGT TCGATGCCTG GCGCTGGGAG
CAGCTGGCCC GCGTCCCCGA TCTGGTGGTG CCGTTCCGCC GCGAGGTCTA CCGCGCCGTG
GCGCAGGCAT TTTCGGGAAT CGCAAGGAGC GGCGGCTACT AA
 
Protein sequence
MDESMTETRP YRPNVGIALF NADGLVFLGR RFRDDGPEII LPGLEWQMPQ GGVDPGEDLQ 
AAARRELWEE TGIRDAEILG ESDWLTYEFP PFKDPNHRLA GFRGQRQKWF AMRFTGREAD
IDPVTPRNGQ PAEFDAWRWE QLARVPDLVV PFRREVYRAV AQAFSGIARS GGY