Gene BBta_0405 details

Gene Information

• Locus tag: BBta_0405
• Symbol: atpH
• ID: 5155648
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bradyrhizobium sp. BTAi1
• Kingdom: Bacteria
• Replicon accession: NC_009485
• Strand: +
• Start bp: 408484
• End bp: 409044
• Gene Length: 561 bp
• Protein Length: 186 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 640555423
• Product: F0F1 ATP synthase subunit delta
• Protein accession: YP_001236597
• Protein GI: 148252012
• COG category: [C] Energy production and conversion
• COG ID: [COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)
• TIGRFAM ID: [TIGR01145] ATP synthase, F1 delta subunit

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.973166
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 23
• Fosmid unclonability p-value: 0.0739759
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGGCTGCTG AAGATCCCCC CGTGTCCGGT GTGTCCGGTC GTTACGCGAC GGCCCTGTTT 
GAACTGGCCC GTGACGAGAA GTCCGTCGAT GCGGTCAAGG CCGATCTCGA CAAGTTCAAT 
GCTCTTCTCG ATGAAAGCGC CGACCTCAAG CGTCTCGTTC GCAGCCCCGT GTTCGGCGCG 
GACGTGCAGC TGAAGGCGCT GAACGCCGTG CTCGACAAAG CCGGCATCGC CGGCGTTGCG 
GCCAACGTGC TGCGCGTGCT GACCGCCAAT CGCCGTCTGT TCGCAGTGGC CGATGTGATC 
CGCGCCTTCA ACGCGCTGGT CGCAAAGTAC AAGGGTGAAG CCACGGCCGA CGTCACCGTC 
GCCGAGCCGC TCTCCGACAA GAATCTCGAC GCCCTGAAGG CCTCACTGAA GACAGTGACC 
GGCAAGGACG TCGCGCTCAA CGTGAAGGTG GATCCAGCGA TCATCGGCGG GCTCGTCGTC 
AAGCTCGGCA GCCGGATGAT CGACAGTTCG CTTCGCACCA AACTCAACTC GATCAAGCAC 
GCGATGAAAG AGGCAGGCTG A 

 

Protein sequence

MAAEDPPVSG VSGRYATALF ELARDEKSVD AVKADLDKFN ALLDESADLK RLVRSPVFGA 
DVQLKALNAV LDKAGIAGVA ANVLRVLTAN RRLFAVADVI RAFNALVAKY KGEATADVTV 
AEPLSDKNLD ALKASLKTVT GKDVALNVKV DPAIIGGLVV KLGSRMIDSS LRTKLNSIKH 
AMKEAG