Gene BBta_0403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0403 
Symbol 
ID5155647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp407285 
End bp407833 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content68% 
IMG OID640555422 
Producthypothetical protein 
Protein accessionYP_001236596 
Protein GI148252011 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.746507 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.06763 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAAC TGAAGAACCT CTCGGCTGGC AAGATCGCCG GCTCGCGCAC CGCGCTCGCT 
GTAGCCGTGA CGTTGATCGT CGGCGGCAGT GCCACCGAAG CCTCGGCCCG CTCCAGGCAT
CATCATCATC ACGCCCGCCA TCACCACCAC CACATGGCGC GCCAAGCCGC TCAGCCCGCG
GCAGACTCCT TTTCGAACGG CTGGTCGTCC AACGGCTCGT CCTGGATGAA CGCCAACGCG
TCGGTCACCC CGACCTCTGG CACCGGCCGC ACCTTCTCCG GCATGGCCTC GTATTACGGC
AACGAGTCCG GCAGCCGCAC CGCCTCCGGT CAGCGTATGA ACGCCAACGC CATGACCTGC
GCCCACCGCT CGCTGCCATT CGGCACCAAG CTGCGCGTGA CCCATGGCGG CCAGAGCGTC
ATCGTCACCG TCAATGACCG TGGCCCGTTC ATCCGTGGCC GGGTGCTCGA CCTCTCGACC
GGCGCCGCCC GCGCCATCGG CCTGACTCGC GCCGGCGTCG GCCGCGTCAC CGCCGAGGTC
GTGTCGTAA
 
Protein sequence
MLKLKNLSAG KIAGSRTALA VAVTLIVGGS ATEASARSRH HHHHARHHHH HMARQAAQPA 
ADSFSNGWSS NGSSWMNANA SVTPTSGTGR TFSGMASYYG NESGSRTASG QRMNANAMTC
AHRSLPFGTK LRVTHGGQSV IVTVNDRGPF IRGRVLDLST GAARAIGLTR AGVGRVTAEV
VS