| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0401 |
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| Symbol | xerC |
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| ID | 5155653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 403699 |
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| End bp | 404673 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640555420 |
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| Product | site-specific tyrosine recombinase XerC |
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| Protein accession | YP_001236594 |
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| Protein GI | 148252009 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.145415 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAGG ACATAAGCGA CGCGCCCCAA GCCCCCGATC TCCTCGGCGC CGACGAGGGC
GTCATCCGCG CCATGATGCA GTGGCTGGCG CATCTGCGCA GCGAGCGGCG GCTGTCGCCA
AAGACGGTGG AGGCCTATGC GCGCGACCTC AGGCAATGCC TGCAATTCCT CTGCACGCAT
TGGGGTGGGC CGGTGACCTT GGCGCGCTTC GCCGCGCTGG AGGCCGCCGA CATCCGCGCC
TTCATGGCGA TGCGCCGCGC CGACGACATT GCCGGGCGCT CCTTGATGCG GACATTGGCG
GGCTTGCGCT CGTTCGGCCG CTTTCTGGAG CGCGAGGGCC AAGGCAAGGT CGGCGCGCTC
GCCGGGATCC GCGCGCCGAA AATCGCCAAG AGCCTGCCGA AACCGCTGCC GATGGACGCC
GCCAAGCGGC TCGCCGATGC CGATGAGCGC GCTGGCGAGA CGCGCGAGAC CTGGGTTTTG
GCGCGCGATG CCGCCGTGAT GGCCCTGCTC TACGGCTCGG GCCTGCGCAT CTCCGAGGCG
CTCGGCCTGA AGCGGCGCGA GGTGCCGCGG CCTGGCGAAG GCGACGTGCT GGTGGTCACC
GGCAAGGGCA ACAAGACCCG TATGGTGCCG GTGCTGCAGA ACGTGCTGCA ACTGATCGAC
GACTACGCCC GGCTCTGTCC CTATCCGCTG CCTGCGGAGG GGCCGATGTT TCTCGGCGCC
AAGGGCGGCC CGTTGAGCCC GCGCATCATC CAGCTCGCGA TGGAGCGGCT GCGCGGCGCG
CTCGGCCTGC CCGACAGCGC CACACCGCAC GCGCTGCGGC ATTCCTTCGC GACGCACCTG
TTGTCGCGCG GTGGCGACCT GCGCGCGATC CAGGAGCTGC TCGGCCACGC CTCGCTGTCG
ACCACGCAGG TCTATACCGG CATCGATTCG GAGCGGCTGC TGCAGGTCTA CGCGTCAGCG
CATCCGCGGC GCTGA
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| Protein sequence | MEKDISDAPQ APDLLGADEG VIRAMMQWLA HLRSERRLSP KTVEAYARDL RQCLQFLCTH
WGGPVTLARF AALEAADIRA FMAMRRADDI AGRSLMRTLA GLRSFGRFLE REGQGKVGAL
AGIRAPKIAK SLPKPLPMDA AKRLADADER AGETRETWVL ARDAAVMALL YGSGLRISEA
LGLKRREVPR PGEGDVLVVT GKGNKTRMVP VLQNVLQLID DYARLCPYPL PAEGPMFLGA
KGGPLSPRII QLAMERLRGA LGLPDSATPH ALRHSFATHL LSRGGDLRAI QELLGHASLS
TTQVYTGIDS ERLLQVYASA HPRR
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