| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0392 |
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| Symbol | mdh |
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| ID | 5154257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 392201 |
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| End bp | 393169 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640555411 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_001236585 |
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| Protein GI | 148252000 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0039] Malate/lactate dehydrogenases |
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| TIGRFAM ID | [TIGR01763] malate dehydrogenase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.293299 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.208989 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGCG ACAAGATTGC TTTGATTGGC TCCGGTCAGA TCGGCGGAAC GCTGGCTCAC
CTCATCGGCC TCAAGGAGCT CGGCGATGTC GTCATGTTCG ACATTGCTGA AGGCGTCCCG
CAGGGCAAGG CGCTCGACAT CGCCCAGTCC TCCCCGGTCG ATGGCTTCGA CGCCCATTAC
AGTGGCGCCA ACTCCTACGA AGCGCTGGAT AACGCCAAGG TCTGCATCGT CACCGCCGGC
GTGCCGCGCA AGCCGGGCAT GAGCCGCGAC GATCTCCTGT CGATCAACCT CAAAGTCATG
GAGCAGGTCG GCGCCGGCAT CAAGAAGTAC GCCCCCGACG CGTTCGTCAT CTGCATCACC
AACCCGCTCG ACGCGATGGT CTGGGCGCTG CAGAAGGCCT CGGGCCTGCC GGCCAAGAAG
GTCGTCGGCA TGGCCGGCGT GCTCGACTCC GCGCGCTTCC GCTACTTCCT GGCCGATGAG
TTCAACGTCT CGGTCGAGGA CGTCACCGCC TTCGTGCTCG GTGGTCATGG CGACACGATG
GTGCCGCTGA CCAAGTACTC CACCGTCGCC GGCATTCCGC TGCCCGACCT CGTCAAGATG
GGCTGGACCT CGCAGGCCCG CATCGACGAG ATCGTAGACC GCACCCGCAA TGGCGGCGCC
GAGATCGTCA ACCTTCTCAA GACCGGGTCG GCCTATTACG CGCCGGCGGC CTCGGCGATC
GCGATGGCCG AGAGCTATCT GCGCGACAAG AAGCGCGTGC TGCCCTGCGC CGCCCATCTC
AACGGCGAGT TCGGCGTCAA GGACATGTAT GTCGGCGTTC CCGTCGTGAT CGGTTCCAAG
GGCGTCGAGC GCATTGTCGA GATCGAGCTG GCCGGCAAGG ACCGCGAGGC GTTCGACAAG
TCGGTGGCCG CCGTGCAGGG CCTGGTCGAC GCCTGCAAGA AGATCGCGCC CGACCTGCTC
GGTCGCTGA
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| Protein sequence | MARDKIALIG SGQIGGTLAH LIGLKELGDV VMFDIAEGVP QGKALDIAQS SPVDGFDAHY
SGANSYEALD NAKVCIVTAG VPRKPGMSRD DLLSINLKVM EQVGAGIKKY APDAFVICIT
NPLDAMVWAL QKASGLPAKK VVGMAGVLDS ARFRYFLADE FNVSVEDVTA FVLGGHGDTM
VPLTKYSTVA GIPLPDLVKM GWTSQARIDE IVDRTRNGGA EIVNLLKTGS AYYAPAASAI
AMAESYLRDK KRVLPCAAHL NGEFGVKDMY VGVPVVIGSK GVERIVEIEL AGKDREAFDK
SVAAVQGLVD ACKKIAPDLL GR
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