Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0390 |
Symbol | |
ID | 5154854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 390050 |
End bp | 390589 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640555409 |
Product | putative 2'-5' RNA ligase |
Protein accession | YP_001236583 |
Protein GI | 148251998 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1514] 2'-5' RNA ligase |
TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.117956 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.359257 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCGTC TGTTTACTGG ACTGGAGATC CCGGCCGAGG TCGGCCAGAC TCTCTCCAAT TTGCGGGGTG GCCTTCCCGG CGCCCGCTGG ATCGATCCGG AAAATTACCA CGTCACCTTG CGTTTCATCG GCGATATCGA CGGCGCGTCG GCCAACGAGA TCGCCGCGAT GCTGTGGCGG GTCAACCGCA AGCCGTTCGA AGTCACGGTG CAGGGTCTCT CGAGCTTCGG CGGCCGCAAG CCGCGCGCTG TCGTCGCCAA CATCGCGCCC AGCCGGCCGC TGATCGAGCT GCAGGCCGAG CTGGAACGCA TGATGCAGCG GATCGGGCTC GATCCCGAGG GACGCAAATT CGTGCCGCAT GTGACCTTGG CGCGGCTGCA CGACGCATCG AGCCAGGACG TCGCCGATTA TCTGTCGGTC CGGGGCTACT TCCCGAGCCG GGTGTTCGTC GCCGAGCGCT TCGTGTTGTT CTCGTCCCGT GCTTCGACGG GGGGCGGGCC CTATGTCGTG GAGGATGCCT ACGACCTCTG CGCCGTCTAA
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Protein sequence | MPRLFTGLEI PAEVGQTLSN LRGGLPGARW IDPENYHVTL RFIGDIDGAS ANEIAAMLWR VNRKPFEVTV QGLSSFGGRK PRAVVANIAP SRPLIELQAE LERMMQRIGL DPEGRKFVPH VTLARLHDAS SQDVADYLSV RGYFPSRVFV AERFVLFSSR ASTGGGPYVV EDAYDLCAV
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