| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0380 |
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| Symbol | ccmB |
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| ID | 5155251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 377673 |
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| End bp | 378341 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640555399 |
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| Product | heme ABC transporter (heme exporter protein B), permease protein (cytochrome c biogenesis) |
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| Protein accession | YP_001236573 |
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| Protein GI | 148251988 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01190] heme exporter protein CcmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.969313 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGCCC TCGCTGCCCT CATTCGCCGC GACATCAGAA TCGCGCTGCG CATCGGCGGC
GGCGCGCTGA TTGGGGTGCT GTTCTTTCTC ACCGTCGTGG TGCTGATGCC GTTCGCGGTC
GGGCCCGACC TCGCGCTGCT GACCCGGCTC GGCCCGGCGA TCCTGTGGCT CGGCGCCCTG
CTCGCCAGCC TGCTGACCCT CGACAGGTTG TTCACCGCCG ACCATGAGGA CGGCTCGCTC
GACCTGATCG TGATGAGCCG GACGCCGCTG GAGCTCGCCT GCGCCGCCAA GGCGCTGGCG
CACTGGCTCG CCGCCGGCCT GCCGCTGGTG ATCGCCACGC CGGTTCTCGG CCTGCTGCTG
AACCTCGACG CGACCGCCAC CGGCGCTGTC GCGCTGACCT TGCTGGCCGG AACGCCGGCG
CTGACCTTCA TCGGCATGAT CGGTGCGGCG CTGGCGGTGA CGATGTCACG CGGCGGGTTG
CTGTTGGCCG TGCTGGTGCT GCCACTATCG ATCCCGGTGC TGATCTTCGG CGTGGCGGCG
TCGCAGGCGG CGATTGTAGG CCCGCTGCCG TTCGGCGCGC CGTTCTCGAT CCTTTGCGCC
TTGTCGCTGG TTAGCTTCGT GATCGGTCCC TTCGCAGCCG CAACAAGCCT CCGCAACGGC
CTGGACTAA
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| Protein sequence | MTALAALIRR DIRIALRIGG GALIGVLFFL TVVVLMPFAV GPDLALLTRL GPAILWLGAL
LASLLTLDRL FTADHEDGSL DLIVMSRTPL ELACAAKALA HWLAAGLPLV IATPVLGLLL
NLDATATGAV ALTLLAGTPA LTFIGMIGAA LAVTMSRGGL LLAVLVLPLS IPVLIFGVAA
SQAAIVGPLP FGAPFSILCA LSLVSFVIGP FAAATSLRNG LD
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