| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0368 |
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| Symbol | ffh |
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| ID | 5152048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 366506 |
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| End bp | 368053 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640555387 |
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| Product | signal recognition particle subunit FFH/SRP54 (srp54) |
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| Protein accession | YP_001236561 |
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| Protein GI | 148251976 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.600679 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTCGACA ATCTGTCGGA AAGGCTTGGC GGCATTCTCG ATCGGCTGAC GGGGCGTGGT
TCGCTCTCGG AAGCCGATGT CGACGCCGCG ATGCGCGAGG TCCGCCGGGC CCTGCTCGAG
GCGGACGTCG CGCTGGAAGT TGTCCGCAGC TTCACCGAGC GCGTGCGCGA GCAGGCGATC
GGCGCCACCG TCGTCAAGTC GGTGACCCCT GGCCAGATGG TCGTCAAGAT CGTCCATGAC
GAGCTGGTCA AGACGCTCGG CGACGACGGC CAGACCATCG ACCTCAACGC CGTGCCGCCG
GTGCCGATCA TGATGGTCGG CCTGCAGGGC TCCGGCAAGA CCACCACCAC CGCAAAGCTC
GCGCGCCGCA TGGTCCAGCG CGACAAGCGC AAGGTGCTGA TGGCCTCGCT CGACGTCTAC
CGTCCGGCCG CCATGGAGCA GCTCGCGGTG CTCGGCCGCG ACCTGGACAT CCCGACCTTG
CCGATCGTCG CCGGCCAGAT GCCGCCGCAG ATCGCGCGCC GCGCCATCGA GGCTGCCAAG
CTCGGCGGCT ACGACGTCGT GCTGCTCGAC ACCGCCGGCC GCACCACGCT GGACGAGGAC
ATGATGAAGG AGGCCGCCGA GATCAAGGCG GTCGCCAACC CGCACGAGGT GCTGCTGGTC
GCGGACTCTC TGACCGGCCA GGACGCCGTC AATCTCGCCC GCGCGTTCGA CCAGCGCGTC
GGCCTCACCG GTATCGCGCT GACCCGGATC GACGGCGACG GCCGCGGCGG CGCCGCGCTG
TCGATGCGTG CCGTCACCGG CAAGCCGATC AAGCTGCTCG GCACCGGCGA AAAGACCGAT
GCGCTGGAGG ATTTCTATCC TTCGCGTATC GCCGGCCGCA TCCTCGGCAT GGGCGACATC
GTCTCGCTGG TCGAGAAGGC CGCGGCGAAC ATCGACGCCG AAAAGGCCGC CCGCGCCGCC
GAGAAGATGC GCAAGGGTCA GTTCGACCTC AACGACATGC GCGAGCAGCT CCTGCAGATG
GCGCAGATGG GCGGCATCAG CGGGCTGATG GGCATGATGC CCGGCATCTC CAAGATGAAG
AACCAGATCG CGGCCGCCGG GATCGACGAC AAGATCCTCA AGCGCCAGGT CGCGATCATC
GATTCGATGA CCCGAGAGGA GCGCAAGCAT CCCGACCTGC TCAAGGCCAG CCGCAAGAAG
CGCATCGCCG CCGGCTCCGG CCAGAGCGTC GAGCACGTCA ACAAGCTGCT CAAGATGCAC
CGGAACATGG CCGACGTGAT GAAGGCCATG GGCTCCGGCA AGCGCGGCCC GCTGGCCGGC
ATCGCCCAGG CGATGGGGTT TGGCGGCGGT GGCGGCATGC CCTCGCCCGA GCAGCTCAAG
GCGCTCGCGG AAAAGATGCC GGGTGGCATG CCCGGCGGTC TGCCGAACCT GCCGAAGGAT
CTTCCCGCCG GCCTGCGCGG CGGTTTGCCC AATCTGCCGG GCCTCACCGG CCTCAGCGGC
AAGCCGACGC TGCCGGGCCT TGGCCTGCCT CCGGGGAAAA AGAAATGA
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| Protein sequence | MFDNLSERLG GILDRLTGRG SLSEADVDAA MREVRRALLE ADVALEVVRS FTERVREQAI
GATVVKSVTP GQMVVKIVHD ELVKTLGDDG QTIDLNAVPP VPIMMVGLQG SGKTTTTAKL
ARRMVQRDKR KVLMASLDVY RPAAMEQLAV LGRDLDIPTL PIVAGQMPPQ IARRAIEAAK
LGGYDVVLLD TAGRTTLDED MMKEAAEIKA VANPHEVLLV ADSLTGQDAV NLARAFDQRV
GLTGIALTRI DGDGRGGAAL SMRAVTGKPI KLLGTGEKTD ALEDFYPSRI AGRILGMGDI
VSLVEKAAAN IDAEKAARAA EKMRKGQFDL NDMREQLLQM AQMGGISGLM GMMPGISKMK
NQIAAAGIDD KILKRQVAII DSMTREERKH PDLLKASRKK RIAAGSGQSV EHVNKLLKMH
RNMADVMKAM GSGKRGPLAG IAQAMGFGGG GGMPSPEQLK ALAEKMPGGM PGGLPNLPKD
LPAGLRGGLP NLPGLTGLSG KPTLPGLGLP PGKKK
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