| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0366 |
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| Symbol | rimM |
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| ID | 5152046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 365309 |
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| End bp | 365905 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640555385 |
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| Product | 16S rRNA-processing protein RimM |
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| Protein accession | YP_001236559 |
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| Protein GI | 148251974 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.875502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.464938 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCAAGC TCATCTGCGT TGCCAAAATC GGCGCCGCGC ACGGCGTGCG CGGCGAGGTT
CGCCTGTGGA CCTTCACCGA GGATCCGCTG GCCGTGCTGC ATTACGGCCC GCTCACGACC
AAGGACGGCA GCCGATCTTT CGAGGTCGCC AAGGCGCGCG AGGCCAAGGA TCATCTCGTC
GCAACGATCA AAGGCGTCAC CGACCGCAAT GCGGCCGAGC GGCTCAACGG GCTCGAGCTC
TATGTGCCGC GCGACCGCCT GCCGGAGACC GATGACGACG AATACTACCA TGCCGACCTG
ATCGGCCTGG CTGCAGAGAC GACGGCGGGC GCACCGCTCG GCCGTGTGCT CGCGATCCAT
AATTTCGGCG CCGGCGACAT CATCGAGATC GCCCCGCCCT CCGGCAGCAC GCTGATGCTG
CCGTTCACAA ATGCTGTGGT GCCGACGGTG GATCTCGCCG GCGGGCGGGT GATCATCGAA
CTGCCCGCGG AGATCGAGGG CGAGGATCAA GACTCGTCTG ACAATGCAGG TTCACCAGAG
GGCGATGCTG CCGCCTCAAA CTCAGCTCGT CATCCCCGCG AAAGCGGGGA TCCATAG
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| Protein sequence | MSKLICVAKI GAAHGVRGEV RLWTFTEDPL AVLHYGPLTT KDGSRSFEVA KAREAKDHLV
ATIKGVTDRN AAERLNGLEL YVPRDRLPET DDDEYYHADL IGLAAETTAG APLGRVLAIH
NFGAGDIIEI APPSGSTLML PFTNAVVPTV DLAGGRVIIE LPAEIEGEDQ DSSDNAGSPE
GDAAASNSAR HPRESGDP
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