Gene BBta_0345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0345 
Symbol 
ID5148943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp353782 
End bp354348 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content63% 
IMG OID640555368 
Producthypothetical protein 
Protein accessionYP_001236542 
Protein GI148251957 
COG category[S] Function unknown 
COG ID[COG2862] Predicted membrane protein 
TIGRFAM ID[TIGR00645] conserved hypothetical transmembrane protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0682824 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGAAA AAACAACGAC CGAGCCGACG CGGGTGCAGG CGCCCGTGTC CGGCCAGCAT 
GCGCCGTCGA AGCTGGAGCG CGGGCTCGAG GGCTTCCTGT TCAAGAGCCG CTGGTTGATG
GCGCCCTTCT ATGTCGGGCT GATCGTCAGC CTCGCCGTGC TCCTGTTCAA ATTCGTGCTG
CTGCTGTGGG AGAATGTCGT GCATCTTCCC ACCGCCAAGG AGAGCGACAT CATCCTCGGC
GTGCTCAGCC TGATCGATGT CTGCCTGACC GGCAATCTGG TGCTGATCGT GGTGTTCTCA
GGCTATGAGA ACTTCGTCTC GCGCATCGAT CCCGGCGGCC ATCCGGACTG GCCGGAATGG
ATGACCAAGG TCGACTTCGC CGGCCTGAAG CAGAAGCTGC TCGCCTCGAT CGTCGCGATC
TCGGCGATCC AGCTGCTCAA GGCGTTCATG AATCTCGACG CGGGCTACGA CTCGGTCAAG
CTCGCCTGGC TGGTCGGCGT GCACATGACC TTCGTCGTCT CGACCGTGAT GCTGGCGCTG
TCGGATCGCT GGAGCGGCGG GCACTGA
 
Protein sequence
MAEKTTTEPT RVQAPVSGQH APSKLERGLE GFLFKSRWLM APFYVGLIVS LAVLLFKFVL 
LLWENVVHLP TAKESDIILG VLSLIDVCLT GNLVLIVVFS GYENFVSRID PGGHPDWPEW
MTKVDFAGLK QKLLASIVAI SAIQLLKAFM NLDAGYDSVK LAWLVGVHMT FVVSTVMLAL
SDRWSGGH