Gene BBta_0344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0344 
Symbolasd 
ID5148942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp352705 
End bp353739 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content63% 
IMG OID640555367 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_001236541 
Protein GI148251956 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.034026 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTACA AAGTCGCAGT GGTCGGCGCG ACCGGCAATG TCGGACGGGA AATGCTCAAT 
ATTCTGGATG AGCGCAAATT CCCCGCGGAC GAGGTCGTGG CGCTCGCCTC ACGCCGCAGC
GTCGGCGTCG AAGTGTCCTA TGGCGACCGC ACGCTGAAGG TCAAAGCGCT CGAGCACTAC
GATTTTGCCG ATGTCGACAT CTGCCTGATG TCCGCCGGTG GCACGGTCTC GAAGGAGTGG
TCGCCGAAGA TCGGCGCCGC CGGTGCGGTC GTGATCGACA ATTCGTCGGC CTGGCGCATG
GATCCCGACG TGCCGCTGAT CGTGCCCGAG GTCAATGCCG ATGCCGCCGC GGGCTTCACC
AAGAAGCATA TCATCGCCAA TCCGAACTGC TCGACCGCGC AGCTCGTCGT CGCGCTGAAG
CCGCTGCATG ACAAGGCCCA CATCAAGCGC GTCGTGGTGT CTACCTATCA ATCGGTCTCG
GGCGCCGGCA AGGACGCGAT GGACGAGCTG TTCTCGCAGA CCAAGGCCGT CTACACCAAT
GACGAGCTGG TCAACAAGAA ATTCCCCAAG CGCATCGCCT TCAACGTCAT CCCGCACATC
GACGTCTTCA TGGAAGACGG CTTCACCAAG GAAGAGTGGA AGATGATGGC GGAGACCAAG
AAGATCCTGG ATCCGAAGAT CAAGCTGACC GCGACCTGCG TGCGCGTGCC GGTGTTCGTC
GGCCACTCCG AGGCGGTCAA CGTCGAGTTC GAGCAGCCGA TCACCGCGGA TGAAGCGCGC
GAGATTCTCC GCCGTGCGCC GGGCTGCCTG GTCATCGACA AGCAGGAGCC CGGCGGCTAC
GCGACGCCCT ATGAGGCCGC TGGCGAGGAC GCGACCTATA TCAGCCGCAT CCGCGAGGAC
GCGACGGTCG AGAACGGCCT CGCCTTCTGG TGCGTGTCGG ACAATCTGCG CAAGGGCGCG
GCCCTCAACG CCATCCAGAT CGCGGAAGTC CTCATCAATC GCAAGTTGAT CACGGCCAAG
AAGAAGGCCG CCTGA
 
Protein sequence
MGYKVAVVGA TGNVGREMLN ILDERKFPAD EVVALASRRS VGVEVSYGDR TLKVKALEHY 
DFADVDICLM SAGGTVSKEW SPKIGAAGAV VIDNSSAWRM DPDVPLIVPE VNADAAAGFT
KKHIIANPNC STAQLVVALK PLHDKAHIKR VVVSTYQSVS GAGKDAMDEL FSQTKAVYTN
DELVNKKFPK RIAFNVIPHI DVFMEDGFTK EEWKMMAETK KILDPKIKLT ATCVRVPVFV
GHSEAVNVEF EQPITADEAR EILRRAPGCL VIDKQEPGGY ATPYEAAGED ATYISRIRED
ATVENGLAFW CVSDNLRKGA ALNAIQIAEV LINRKLITAK KKAA