Gene BBta_0311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0311 
Symbol 
ID5153348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp315184 
End bp316461 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content62% 
IMG OID640555335 
Productputative glucose/sorbosone dehydrogenase 
Protein accessionYP_001236509 
Protein GI148251924 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2133] Glucose/sorbosone dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.229371 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.654077 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCGG CTTTTCACCG AAGCATTCTT GCGCTTGCTA CAATTGGTCT TCTCGCCGGC 
ACCAGCATCG CCGGCGCGCA GCAGCAATCC GACCAGGGTA AGGGTCTGAA GAAATACGAA
TCCGGCACCA AGGAGTTCTG GACGCATCCG CCGGATGACT GGTTCCTCGG CGACGAGACC
GAGGCGCAGA AGGGGCTCGC GCCGCCGTCC GGTCCGCCGA CCGGCGCGTC GGACGCGGAG
CTCGCCAAGA TCGTCAAGCA GGTCAAGCTG CCGGACGGCT TCAAGATGGA AGTCTGGGCC
TCGGGCGTGC TGGCCGCGCG GCAGATGGCG TGGGGCGACA AGGGCACGCT GTTCGTCGGC
TCATTCGGTC TCGGCAACGT CTATGCGATC AGCGACAAGG GCGGCAAGCG CGAGGTCAAG
ACGGTCCTCA AGGGCCTGAA CATGCCGACC GGCCTCGCCT TCCAGGACGG CAATCTCTAC
GTCATCGCCG TCGACAAGCT CATCAAATAC GAGAATGCCG AGGCCAATCT CGACAATCTC
GGCCAGGGCA AGGTGGTCTA TGACGACATG CCCTCTTATG CCGCGCATGG CTGGAAATAC
ATCGCGGTCG ACAAAGAGGG CTGGTTCTAT ATTCCGTTCG GACCGCCCTT CAATATCGGC
ATTCCGCCGA CATCCGTGTC GCAGATCCGA CGCGTCGATC CGCGCACCGG CAATGCCGAG
ATCTGGGCGC TCGGCGTGCG CAACAGCGTC GGCGGCGACG TCGATCCGCG CACCGGCCGC
TATTGGTTCA CCGAGAATGC GCGTGATTGG GTCAGCGACG ACCTGCCGAG CGACAAGCTC
AACATGATCT CGAAGATCGG CGAGCATTTC GGCTATCCCT ATTGTCACCA GGGTGACATG
CCGGATCCGA AATTTGCGAT GGGCCACAAA TGCTCGGAGT TCACGCCGCC GGTGCTGAAC
CTAGGTGCTC ACGTCGCGCC GCTCGGAATG AAGTTCTATA CCGGTGACCA GTTCCCCGCC
GAGTACAAGA ACAACATTCT CATCGCCGAG CACGGCTCCT GGAACCGGCA CAAGTACCAG
GGCGCCCGGA TCATGCGCGT GATCGTCGGC CCCGACGGCA AGGATGCCAA GCAGGAGGTG
TTCGCCTCCG GTTGGATCGA GGGCGATCAG GGCTATCTCG GCCGTCCCGA TGACATCATC
CTCGCCAAGG ACGGCTCGAT CCTGGTGGCG GACGACTGGG CCGGCGCGAT CTATCGCATC
AGCTACGAGA AGAAGTGA
 
Protein sequence
MTSAFHRSIL ALATIGLLAG TSIAGAQQQS DQGKGLKKYE SGTKEFWTHP PDDWFLGDET 
EAQKGLAPPS GPPTGASDAE LAKIVKQVKL PDGFKMEVWA SGVLAARQMA WGDKGTLFVG
SFGLGNVYAI SDKGGKREVK TVLKGLNMPT GLAFQDGNLY VIAVDKLIKY ENAEANLDNL
GQGKVVYDDM PSYAAHGWKY IAVDKEGWFY IPFGPPFNIG IPPTSVSQIR RVDPRTGNAE
IWALGVRNSV GGDVDPRTGR YWFTENARDW VSDDLPSDKL NMISKIGEHF GYPYCHQGDM
PDPKFAMGHK CSEFTPPVLN LGAHVAPLGM KFYTGDQFPA EYKNNILIAE HGSWNRHKYQ
GARIMRVIVG PDGKDAKQEV FASGWIEGDQ GYLGRPDDII LAKDGSILVA DDWAGAIYRI
SYEKK