| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0309 |
|---|
| Symbol | |
|---|
| ID | 5153347 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 313508 |
|---|
| End bp | 314854 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640555334 |
|---|
| Product | putative amidase (amiD) |
|---|
| Protein accession | YP_001236508 |
|---|
| Protein GI | 148251923 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.613123 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.504798 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGATG CGTTCATTCT GCCGCCACCG CAGGCCGGCG CCGGCGTCCT CGATTTGTTG
CGACAGTTCG CAGCCGATCC GCAAGCAGCG GAGAGCTATG GTGCAGACTG CCTGAAGCGC
ACCGAGGCGA TCGAGGCGCG GCTGAAGTCG TTCGAATATC TGCCGAAGGA TGTGTCCGCG
AAAAATGGTC CGCTCGGCGG AATTCCGGTT GCGGTCAAGG ACATCATCGC CACCTCGGAC
ATGCCGACCA GCAATGGCTC GCCGATCTAC CGGGATCATG TGCCGGCCGC GGATGCCTGG
GTGGTCGCGC GGCTGCGCAA TCTCGGCGCA ACGATTTTCG GCAAGACCGT CTCGACGGAA
TTCGCCTGGC GTCATCCCGG GCCGACGGTC AATCCATGGA ACCCGGCGCA TACCCCCGGC
GGCTCATCCT CGGGCTCGGC GGCCGCCGTG GCAGCGGGGC TGGTGCCGCT GGCCTTGGGC
ACGCAGACCC TGGGATCGGT CATCCGCCCG GCGGCCTTCA ACGGCGTCGT CGGCTTCAAG
CCGAGCTTCG GCGCGATCCC GCGCGTCGGC GTGCATCCGC TCAGCCCGTC GCTGGATCAT
GTCGGCTTCT TCGCCCGCCG CGTCGATGAC GTGGCGCTGG CACTGTCGCT GCTGGCGGGA
CGCAGCGACG ATGATCCCCA CGGCCGCCCG CTGCCCGGTT TTACCGTCGA CATCGCCCAC
GGCCTCCGTC CGCTGGCGAG TCCACGGCTC GCGGTCGTGC GCTTTGCCAA ATGGGAGCTC
GCCGAGCCTG AGCAGAAGGC GGTGTTCGAG GCTGCCGTCG AGCGACTGCG CAGCGCCGGC
GCGGTGGTCG AGGAGATCGC CCTGCCCGCG CTCGACGCGG CGCATTGGGA TGCGATCAAT
ACGATCATGC TGAGCGAGGC GACGACGATC TTCTCCGATC TGATCGCACG CTTCCCCGAC
CGCGTCAGCG ACGTGATGAA GGCGCATGTC GCGAGCGGGC GGAGCAAGAC GGCGATGGAG
TATCTGACCG CCAAGGCGGC GCAGGCCGAA CGGCAGCACG CCCTCGCCAC CGAGCTCGGC
GGCTTCGACG CCGTGCTCAC CTTGCCGGCC TTCGGCGAAG CCCCGCATGG CCTCGACTGG
ACCGGCGACG CCGAATATTG CGCCCCCTGG ACGTTCGTCG GCGCGCCCGC GGTGTCGCTG
CCGGCAGGAT TCGGCCGGCA CGGCCTGCCG CTGGGCGTGC AGATCGCCGG CGTCTACCGC
AACGACCTCC ATGTTCTGCG CGTCGCCAAA TGGGCCGAGG CGGCGCTGGC CTTCGATCCC
GGCCTGCCAC TGCTGGCGCG TCACTAA
|
|---|
| Protein sequence | MSDAFILPPP QAGAGVLDLL RQFAADPQAA ESYGADCLKR TEAIEARLKS FEYLPKDVSA
KNGPLGGIPV AVKDIIATSD MPTSNGSPIY RDHVPAADAW VVARLRNLGA TIFGKTVSTE
FAWRHPGPTV NPWNPAHTPG GSSSGSAAAV AAGLVPLALG TQTLGSVIRP AAFNGVVGFK
PSFGAIPRVG VHPLSPSLDH VGFFARRVDD VALALSLLAG RSDDDPHGRP LPGFTVDIAH
GLRPLASPRL AVVRFAKWEL AEPEQKAVFE AAVERLRSAG AVVEEIALPA LDAAHWDAIN
TIMLSEATTI FSDLIARFPD RVSDVMKAHV ASGRSKTAME YLTAKAAQAE RQHALATELG
GFDAVLTLPA FGEAPHGLDW TGDAEYCAPW TFVGAPAVSL PAGFGRHGLP LGVQIAGVYR
NDLHVLRVAK WAEAALAFDP GLPLLARH
|
|---|
| |